Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Cpne1Q8C166 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpne1Q8C166 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cpne1Q8C166 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cpne1Q8C166 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cpne1Q8C166 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cpne1Q8C166 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cpne1Q8C166 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Cpne1Q8C166 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cpne1Q8C166 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cpne1Q8C166 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.32■■□□□ 1.16
Cpne1Q8C166 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cpne1Q8C166 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cpne1Q8C166 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cpne1Q8C166 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cpne1Q8C166 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Cpne1Q8C166 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Cpne1Q8C166 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpne1Q8C166 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cpne1Q8C166 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpne1Q8C166 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.28■■□□□ 1.16
Cpne1Q8C166 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cpne1Q8C166 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Cpne1Q8C166 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cpne1Q8C166 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpne1Q8C166 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cpne1Q8C166 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cpne1Q8C166 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cpne1Q8C166 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cpne1Q8C166 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.23■■□□□ 1.15
Cpne1Q8C166 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.23■■□□□ 1.15
Cpne1Q8C166 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cpne1Q8C166 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.21■■□□□ 1.15
Cpne1Q8C166 Nkain2-201ENSMUST00000092602 558 ntBASIC22.21■■□□□ 1.15
Cpne1Q8C166 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Cpne1Q8C166 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.2■■□□□ 1.14
Cpne1Q8C166 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpne1Q8C166 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpne1Q8C166 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.18■■□□□ 1.14
Cpne1Q8C166 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.18■■□□□ 1.14
Cpne1Q8C166 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
Cpne1Q8C166 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cpne1Q8C166 Gm6821-201ENSMUST00000107540 542 ntBASIC22.17■■□□□ 1.14
Cpne1Q8C166 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.17■■□□□ 1.14
Cpne1Q8C166 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Cpne1Q8C166 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Cpne1Q8C166 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cpne1Q8C166 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
Cpne1Q8C166 Gm30023-201ENSMUST00000197970 889 ntBASIC22.16■■□□□ 1.14
Cpne1Q8C166 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cpne1Q8C166 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cpne1Q8C166 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cpne1Q8C166 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cpne1Q8C166 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Cpne1Q8C166 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Cpne1Q8C166 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cpne1Q8C166 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cpne1Q8C166 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne1Q8C166 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne1Q8C166 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne1Q8C166 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne1Q8C166 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Cpne1Q8C166 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cpne1Q8C166 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.1■■□□□ 1.13
Cpne1Q8C166 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Cpne1Q8C166 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpne1Q8C166 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpne1Q8C166 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpne1Q8C166 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpne1Q8C166 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cpne1Q8C166 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
Cpne1Q8C166 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Cpne1Q8C166 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.07■■□□□ 1.12
Cpne1Q8C166 Gm8503-201ENSMUST00000118131 455 ntBASIC22.07■■□□□ 1.12
Cpne1Q8C166 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cpne1Q8C166 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cpne1Q8C166 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cpne1Q8C166 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cpne1Q8C166 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Cpne1Q8C166 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cpne1Q8C166 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cpne1Q8C166 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cpne1Q8C166 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.05■■□□□ 1.12
Cpne1Q8C166 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.04■■□□□ 1.12
Cpne1Q8C166 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Cpne1Q8C166 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cpne1Q8C166 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cpne1Q8C166 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cpne1Q8C166 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cpne1Q8C166 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cpne1Q8C166 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cpne1Q8C166 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Cpne1Q8C166 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Cpne1Q8C166 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cpne1Q8C166 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cpne1Q8C166 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.02■■□□□ 1.12
Cpne1Q8C166 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.02■■□□□ 1.12
Cpne1Q8C166 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cpne1Q8C166 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cpne1Q8C166 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms