Protein–RNA interactions for Protein: Q8BVM9

Phf11a, PHD finger protein 11A, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11aQ8BVM9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Phf11aQ8BVM9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Phf11aQ8BVM9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.23■■□□□ 1.15
Phf11aQ8BVM9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Phf11aQ8BVM9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Phf11aQ8BVM9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Phf11aQ8BVM9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Phf11aQ8BVM9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.22■■□□□ 1.15
Phf11aQ8BVM9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Phf11aQ8BVM9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Phf11aQ8BVM9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Phf11aQ8BVM9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Phf11aQ8BVM9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Phf11aQ8BVM9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Phf11aQ8BVM9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Phf11aQ8BVM9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Phf11aQ8BVM9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Phf11aQ8BVM9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Phf11aQ8BVM9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Phf11aQ8BVM9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Phf11aQ8BVM9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Phf11aQ8BVM9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Phf11aQ8BVM9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Phf11aQ8BVM9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Phf11aQ8BVM9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.17■■□□□ 1.14
Phf11aQ8BVM9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Phf11aQ8BVM9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Phf11aQ8BVM9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Phf11aQ8BVM9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Phf11aQ8BVM9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Phf11aQ8BVM9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Phf11aQ8BVM9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Phf11aQ8BVM9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Phf11aQ8BVM9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Phf11aQ8BVM9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Phf11aQ8BVM9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.13■■□□□ 1.13
Phf11aQ8BVM9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Phf11aQ8BVM9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Phf11aQ8BVM9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.11■■□□□ 1.13
Phf11aQ8BVM9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Phf11aQ8BVM9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Phf11aQ8BVM9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Phf11aQ8BVM9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Phf11aQ8BVM9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Phf11aQ8BVM9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Phf11aQ8BVM9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.07■■□□□ 1.12
Phf11aQ8BVM9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Phf11aQ8BVM9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Phf11aQ8BVM9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Phf11aQ8BVM9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Phf11aQ8BVM9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Phf11aQ8BVM9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Phf11aQ8BVM9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Phf11aQ8BVM9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Phf11aQ8BVM9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Phf11aQ8BVM9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Phf11aQ8BVM9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Phf11aQ8BVM9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Phf11aQ8BVM9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.01■■□□□ 1.11
Phf11aQ8BVM9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Phf11aQ8BVM9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Phf11aQ8BVM9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Phf11aQ8BVM9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Phf11aQ8BVM9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Phf11aQ8BVM9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Phf11aQ8BVM9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Phf11aQ8BVM9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Phf11aQ8BVM9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Phf11aQ8BVM9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Phf11aQ8BVM9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Phf11aQ8BVM9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Phf11aQ8BVM9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Phf11aQ8BVM9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Phf11aQ8BVM9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Phf11aQ8BVM9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Phf11aQ8BVM9 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.95■■□□□ 1.1
Phf11aQ8BVM9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Phf11aQ8BVM9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Phf11aQ8BVM9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Phf11aQ8BVM9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Phf11aQ8BVM9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Phf11aQ8BVM9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.93■■□□□ 1.1
Phf11aQ8BVM9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Phf11aQ8BVM9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Phf11aQ8BVM9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Phf11aQ8BVM9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Phf11aQ8BVM9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Phf11aQ8BVM9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Phf11aQ8BVM9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Phf11aQ8BVM9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Phf11aQ8BVM9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Phf11aQ8BVM9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.9■■□□□ 1.1
Phf11aQ8BVM9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Phf11aQ8BVM9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Phf11aQ8BVM9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.88■■□□□ 1.09
Phf11aQ8BVM9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.88■■□□□ 1.09
Phf11aQ8BVM9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Phf11aQ8BVM9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Phf11aQ8BVM9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Phf11aQ8BVM9 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms