Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc30Q8BVF4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc30Q8BVF4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Ccdc30Q8BVF4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccdc30Q8BVF4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.21■■■□□ 2.59
Ccdc30Q8BVF4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Ccdc30Q8BVF4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.18■■■□□ 2.58
Ccdc30Q8BVF4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc30Q8BVF4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.17■■■□□ 2.58
Ccdc30Q8BVF4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc30Q8BVF4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc30Q8BVF4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ccdc30Q8BVF4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.15■■■□□ 2.58
Ccdc30Q8BVF4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc30Q8BVF4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc30Q8BVF4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc30Q8BVF4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc30Q8BVF4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Ccdc30Q8BVF4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc30Q8BVF4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc30Q8BVF4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
Ccdc30Q8BVF4 Gm30023-201ENSMUST00000197970 889 ntBASIC31.09■■■□□ 2.57
Ccdc30Q8BVF4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc30Q8BVF4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc30Q8BVF4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
Ccdc30Q8BVF4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Ccdc30Q8BVF4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ccdc30Q8BVF4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.06■■■□□ 2.56
Ccdc30Q8BVF4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC31.05■■■□□ 2.56
Ccdc30Q8BVF4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc30Q8BVF4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc30Q8BVF4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
Ccdc30Q8BVF4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.04■■■□□ 2.56
Ccdc30Q8BVF4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
Ccdc30Q8BVF4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc30Q8BVF4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc30Q8BVF4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Ccdc30Q8BVF4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31■■■□□ 2.55
Ccdc30Q8BVF4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
Ccdc30Q8BVF4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc30Q8BVF4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc30Q8BVF4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc30Q8BVF4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc30Q8BVF4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC30.98■■■□□ 2.55
Ccdc30Q8BVF4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc30Q8BVF4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc30Q8BVF4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc30Q8BVF4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
Ccdc30Q8BVF4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc30Q8BVF4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc30Q8BVF4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc30Q8BVF4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc30Q8BVF4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.95■■■□□ 2.55
Ccdc30Q8BVF4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Ccdc30Q8BVF4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc30Q8BVF4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc30Q8BVF4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.93■■■□□ 2.54
Ccdc30Q8BVF4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Ccdc30Q8BVF4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ccdc30Q8BVF4 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.92■■■□□ 2.54
Ccdc30Q8BVF4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ccdc30Q8BVF4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ccdc30Q8BVF4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
Ccdc30Q8BVF4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ccdc30Q8BVF4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Ccdc30Q8BVF4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Ccdc30Q8BVF4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Ccdc30Q8BVF4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Ccdc30Q8BVF4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ccdc30Q8BVF4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Ccdc30Q8BVF4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Ccdc30Q8BVF4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.86■■■□□ 2.53
Ccdc30Q8BVF4 Nkain2-201ENSMUST00000092602 558 ntBASIC30.86■■■□□ 2.53
Ccdc30Q8BVF4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Ccdc30Q8BVF4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ccdc30Q8BVF4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Ccdc30Q8BVF4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Ccdc30Q8BVF4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.84■■■□□ 2.53
Ccdc30Q8BVF4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.84■■■□□ 2.53
Ccdc30Q8BVF4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc30Q8BVF4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc30Q8BVF4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC30.83■■■□□ 2.53
Ccdc30Q8BVF4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
Ccdc30Q8BVF4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.82■■■□□ 2.52
Ccdc30Q8BVF4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc30Q8BVF4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.81■■■□□ 2.52
Ccdc30Q8BVF4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc30Q8BVF4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc30Q8BVF4 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.8■■■□□ 2.52
Ccdc30Q8BVF4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc30Q8BVF4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc30Q8BVF4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.79■■■□□ 2.52
Ccdc30Q8BVF4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc30Q8BVF4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.79■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms