Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ppp1r3eQ8BRJ4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ppp1r3eQ8BRJ4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Ppp1r3eQ8BRJ4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ppp1r3eQ8BRJ4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.5■■□□□ 1.19
Ppp1r3eQ8BRJ4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ppp1r3eQ8BRJ4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ppp1r3eQ8BRJ4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ppp1r3eQ8BRJ4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ppp1r3eQ8BRJ4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ppp1r3eQ8BRJ4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ppp1r3eQ8BRJ4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ppp1r3eQ8BRJ4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ppp1r3eQ8BRJ4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ppp1r3eQ8BRJ4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ppp1r3eQ8BRJ4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Ppp1r3eQ8BRJ4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ppp1r3eQ8BRJ4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ppp1r3eQ8BRJ4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Ppp1r3eQ8BRJ4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ppp1r3eQ8BRJ4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ppp1r3eQ8BRJ4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ppp1r3eQ8BRJ4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.41■■□□□ 1.18
Ppp1r3eQ8BRJ4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ppp1r3eQ8BRJ4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.41■■□□□ 1.18
Ppp1r3eQ8BRJ4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ppp1r3eQ8BRJ4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ppp1r3eQ8BRJ4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ppp1r3eQ8BRJ4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ppp1r3eQ8BRJ4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Ppp1r3eQ8BRJ4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ppp1r3eQ8BRJ4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ppp1r3eQ8BRJ4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Ppp1r3eQ8BRJ4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ppp1r3eQ8BRJ4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ppp1r3eQ8BRJ4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ppp1r3eQ8BRJ4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ppp1r3eQ8BRJ4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ppp1r3eQ8BRJ4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ppp1r3eQ8BRJ4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ppp1r3eQ8BRJ4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ppp1r3eQ8BRJ4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ppp1r3eQ8BRJ4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Ppp1r3eQ8BRJ4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ppp1r3eQ8BRJ4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ppp1r3eQ8BRJ4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ppp1r3eQ8BRJ4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Ppp1r3eQ8BRJ4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ppp1r3eQ8BRJ4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ppp1r3eQ8BRJ4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ppp1r3eQ8BRJ4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ppp1r3eQ8BRJ4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Ppp1r3eQ8BRJ4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ppp1r3eQ8BRJ4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ppp1r3eQ8BRJ4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Ppp1r3eQ8BRJ4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ppp1r3eQ8BRJ4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ppp1r3eQ8BRJ4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Ppp1r3eQ8BRJ4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Ppp1r3eQ8BRJ4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ppp1r3eQ8BRJ4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ppp1r3eQ8BRJ4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ppp1r3eQ8BRJ4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ppp1r3eQ8BRJ4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ppp1r3eQ8BRJ4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ppp1r3eQ8BRJ4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ppp1r3eQ8BRJ4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ppp1r3eQ8BRJ4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ppp1r3eQ8BRJ4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ppp1r3eQ8BRJ4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ppp1r3eQ8BRJ4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Ppp1r3eQ8BRJ4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ppp1r3eQ8BRJ4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Ppp1r3eQ8BRJ4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ppp1r3eQ8BRJ4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ppp1r3eQ8BRJ4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ppp1r3eQ8BRJ4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ppp1r3eQ8BRJ4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Ppp1r3eQ8BRJ4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ppp1r3eQ8BRJ4 Gm16148-201ENSMUST00000119653 893 ntBASIC22.23■■□□□ 1.15
Ppp1r3eQ8BRJ4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ppp1r3eQ8BRJ4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Ppp1r3eQ8BRJ4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ppp1r3eQ8BRJ4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ppp1r3eQ8BRJ4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ppp1r3eQ8BRJ4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ppp1r3eQ8BRJ4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ppp1r3eQ8BRJ4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Ppp1r3eQ8BRJ4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.2■■□□□ 1.14
Ppp1r3eQ8BRJ4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Ppp1r3eQ8BRJ4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.19■■□□□ 1.14
Ppp1r3eQ8BRJ4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Ppp1r3eQ8BRJ4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ppp1r3eQ8BRJ4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Ppp1r3eQ8BRJ4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ppp1r3eQ8BRJ4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ppp1r3eQ8BRJ4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ppp1r3eQ8BRJ4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ppp1r3eQ8BRJ4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ppp1r3eQ8BRJ4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms