Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
Rab11fip4Q8BQP8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rab11fip4Q8BQP8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rab11fip4Q8BQP8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Rab11fip4Q8BQP8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Rab11fip4Q8BQP8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rab11fip4Q8BQP8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.42■■□□□ 1.82
Rab11fip4Q8BQP8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rab11fip4Q8BQP8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rab11fip4Q8BQP8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rab11fip4Q8BQP8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rab11fip4Q8BQP8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.4■■□□□ 1.82
Rab11fip4Q8BQP8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.4■■□□□ 1.82
Rab11fip4Q8BQP8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rab11fip4Q8BQP8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Rab11fip4Q8BQP8 Nkain2-201ENSMUST00000092602 558 ntBASIC26.4■■□□□ 1.82
Rab11fip4Q8BQP8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Rab11fip4Q8BQP8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rab11fip4Q8BQP8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rab11fip4Q8BQP8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rab11fip4Q8BQP8 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.39■■□□□ 1.81
Rab11fip4Q8BQP8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rab11fip4Q8BQP8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rab11fip4Q8BQP8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Rab11fip4Q8BQP8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rab11fip4Q8BQP8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Rab11fip4Q8BQP8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rab11fip4Q8BQP8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.36■■□□□ 1.81
Rab11fip4Q8BQP8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rab11fip4Q8BQP8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip4Q8BQP8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip4Q8BQP8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip4Q8BQP8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip4Q8BQP8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rab11fip4Q8BQP8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rab11fip4Q8BQP8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.33■■□□□ 1.81
Rab11fip4Q8BQP8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rab11fip4Q8BQP8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rab11fip4Q8BQP8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rab11fip4Q8BQP8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rab11fip4Q8BQP8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rab11fip4Q8BQP8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.29■■□□□ 1.8
Rab11fip4Q8BQP8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab11fip4Q8BQP8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip4Q8BQP8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Rab11fip4Q8BQP8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
Rab11fip4Q8BQP8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip4Q8BQP8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip4Q8BQP8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.24■■□□□ 1.79
Rab11fip4Q8BQP8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rab11fip4Q8BQP8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.23■■□□□ 1.79
Rab11fip4Q8BQP8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rab11fip4Q8BQP8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rab11fip4Q8BQP8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.22■■□□□ 1.79
Rab11fip4Q8BQP8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rab11fip4Q8BQP8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rab11fip4Q8BQP8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rab11fip4Q8BQP8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rab11fip4Q8BQP8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rab11fip4Q8BQP8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rab11fip4Q8BQP8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Rab11fip4Q8BQP8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Rab11fip4Q8BQP8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.19■■□□□ 1.78
Rab11fip4Q8BQP8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rab11fip4Q8BQP8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rab11fip4Q8BQP8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rab11fip4Q8BQP8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Rab11fip4Q8BQP8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rab11fip4Q8BQP8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rab11fip4Q8BQP8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rab11fip4Q8BQP8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Rab11fip4Q8BQP8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rab11fip4Q8BQP8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rab11fip4Q8BQP8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
Rab11fip4Q8BQP8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.14■■□□□ 1.77
Rab11fip4Q8BQP8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Rab11fip4Q8BQP8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rab11fip4Q8BQP8 Gm7432-201ENSMUST00000210343 879 ntBASIC26.12■■□□□ 1.77
Rab11fip4Q8BQP8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Rab11fip4Q8BQP8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rab11fip4Q8BQP8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rab11fip4Q8BQP8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rab11fip4Q8BQP8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Rab11fip4Q8BQP8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rab11fip4Q8BQP8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rab11fip4Q8BQP8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Rab11fip4Q8BQP8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.09■■□□□ 1.77
Rab11fip4Q8BQP8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rab11fip4Q8BQP8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.07■■□□□ 1.76
Rab11fip4Q8BQP8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rab11fip4Q8BQP8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rab11fip4Q8BQP8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rab11fip4Q8BQP8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rab11fip4Q8BQP8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.06■■□□□ 1.76
Rab11fip4Q8BQP8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rab11fip4Q8BQP8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.05■■□□□ 1.76
Rab11fip4Q8BQP8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Rab11fip4Q8BQP8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rab11fip4Q8BQP8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rab11fip4Q8BQP8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.03■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms