Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Fam78bQ8BQN5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.93■□□□□ 0.62
Fam78bQ8BQN5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam78bQ8BQN5 Gm24804-201ENSMUST00000174982 85 ntBASIC18.93■□□□□ 0.62
Fam78bQ8BQN5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Fam78bQ8BQN5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam78bQ8BQN5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam78bQ8BQN5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam78bQ8BQN5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam78bQ8BQN5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Fam78bQ8BQN5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.92■□□□□ 0.62
Fam78bQ8BQN5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Fam78bQ8BQN5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam78bQ8BQN5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Fam78bQ8BQN5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Fam78bQ8BQN5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam78bQ8BQN5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Fam78bQ8BQN5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fam78bQ8BQN5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Fam78bQ8BQN5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam78bQ8BQN5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam78bQ8BQN5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fam78bQ8BQN5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.88■□□□□ 0.61
Fam78bQ8BQN5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fam78bQ8BQN5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam78bQ8BQN5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78bQ8BQN5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Fam78bQ8BQN5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Fam78bQ8BQN5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78bQ8BQN5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78bQ8BQN5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78bQ8BQN5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Fam78bQ8BQN5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78bQ8BQN5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78bQ8BQN5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78bQ8BQN5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78bQ8BQN5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78bQ8BQN5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78bQ8BQN5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Fam78bQ8BQN5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.82■□□□□ 0.6
Fam78bQ8BQN5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78bQ8BQN5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78bQ8BQN5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78bQ8BQN5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78bQ8BQN5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78bQ8BQN5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78bQ8BQN5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78bQ8BQN5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78bQ8BQN5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78bQ8BQN5 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.8■□□□□ 0.6
Fam78bQ8BQN5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Fam78bQ8BQN5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam78bQ8BQN5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam78bQ8BQN5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Fam78bQ8BQN5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78bQ8BQN5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78bQ8BQN5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Fam78bQ8BQN5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78bQ8BQN5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Fam78bQ8BQN5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam78bQ8BQN5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Fam78bQ8BQN5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Fam78bQ8BQN5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78bQ8BQN5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78bQ8BQN5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78bQ8BQN5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78bQ8BQN5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78bQ8BQN5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78bQ8BQN5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78bQ8BQN5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78bQ8BQN5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78bQ8BQN5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.75■□□□□ 0.59
Fam78bQ8BQN5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78bQ8BQN5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78bQ8BQN5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Fam78bQ8BQN5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78bQ8BQN5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Fam78bQ8BQN5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78bQ8BQN5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78bQ8BQN5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Fam78bQ8BQN5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78bQ8BQN5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78bQ8BQN5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Fam78bQ8BQN5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam78bQ8BQN5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78bQ8BQN5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.72■□□□□ 0.59
Fam78bQ8BQN5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78bQ8BQN5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78bQ8BQN5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78bQ8BQN5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78bQ8BQN5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78bQ8BQN5 Gm16148-201ENSMUST00000119653 893 ntBASIC18.71■□□□□ 0.59
Fam78bQ8BQN5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78bQ8BQN5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78bQ8BQN5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78bQ8BQN5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78bQ8BQN5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.7■□□□□ 0.58
Fam78bQ8BQN5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78bQ8BQN5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78bQ8BQN5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 289.2 ms