Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sfr1Q8BP27 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Sfr1Q8BP27 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sfr1Q8BP27 Gm6821-201ENSMUST00000107540 542 ntBASIC24.27■■□□□ 1.48
Sfr1Q8BP27 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sfr1Q8BP27 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.25■■□□□ 1.47
Sfr1Q8BP27 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.24■■□□□ 1.47
Sfr1Q8BP27 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sfr1Q8BP27 Gm8503-201ENSMUST00000118131 455 ntBASIC24.22■■□□□ 1.47
Sfr1Q8BP27 Amer2-203ENSMUST00000225247 2662 ntBASIC24.22■■□□□ 1.47
Sfr1Q8BP27 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sfr1Q8BP27 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.21■■□□□ 1.47
Sfr1Q8BP27 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sfr1Q8BP27 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sfr1Q8BP27 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.2■■□□□ 1.46
Sfr1Q8BP27 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Sfr1Q8BP27 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sfr1Q8BP27 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Sfr1Q8BP27 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.17■■□□□ 1.46
Sfr1Q8BP27 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
Sfr1Q8BP27 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
Sfr1Q8BP27 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.14■■□□□ 1.45
Sfr1Q8BP27 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Sfr1Q8BP27 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
Sfr1Q8BP27 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Sfr1Q8BP27 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Sfr1Q8BP27 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sfr1Q8BP27 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sfr1Q8BP27 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Sfr1Q8BP27 Gm30023-201ENSMUST00000197970 889 ntBASIC24.11■■□□□ 1.45
Sfr1Q8BP27 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sfr1Q8BP27 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sfr1Q8BP27 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.1■■□□□ 1.45
Sfr1Q8BP27 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Sfr1Q8BP27 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.09■■□□□ 1.45
Sfr1Q8BP27 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Sfr1Q8BP27 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Sfr1Q8BP27 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sfr1Q8BP27 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sfr1Q8BP27 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.07■■□□□ 1.44
Sfr1Q8BP27 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.07■■□□□ 1.44
Sfr1Q8BP27 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Sfr1Q8BP27 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sfr1Q8BP27 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sfr1Q8BP27 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Sfr1Q8BP27 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Sfr1Q8BP27 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Sfr1Q8BP27 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Sfr1Q8BP27 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Sfr1Q8BP27 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Sfr1Q8BP27 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.05■■□□□ 1.44
Sfr1Q8BP27 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Sfr1Q8BP27 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Sfr1Q8BP27 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sfr1Q8BP27 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.03■■□□□ 1.44
Sfr1Q8BP27 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sfr1Q8BP27 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.03■■□□□ 1.44
Sfr1Q8BP27 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.02■■□□□ 1.44
Sfr1Q8BP27 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.02■■□□□ 1.44
Sfr1Q8BP27 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.02■■□□□ 1.44
Sfr1Q8BP27 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sfr1Q8BP27 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sfr1Q8BP27 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Sfr1Q8BP27 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Sfr1Q8BP27 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24■■□□□ 1.43
Sfr1Q8BP27 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sfr1Q8BP27 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Sfr1Q8BP27 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sfr1Q8BP27 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24■■□□□ 1.43
Sfr1Q8BP27 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Sfr1Q8BP27 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sfr1Q8BP27 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sfr1Q8BP27 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.99■■□□□ 1.43
Sfr1Q8BP27 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sfr1Q8BP27 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sfr1Q8BP27 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Sfr1Q8BP27 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sfr1Q8BP27 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sfr1Q8BP27 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.96■■□□□ 1.43
Sfr1Q8BP27 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
Sfr1Q8BP27 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sfr1Q8BP27 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.94■■□□□ 1.42
Sfr1Q8BP27 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.94■■□□□ 1.42
Sfr1Q8BP27 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Sfr1Q8BP27 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Sfr1Q8BP27 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
Sfr1Q8BP27 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Sfr1Q8BP27 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sfr1Q8BP27 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sfr1Q8BP27 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.92■■□□□ 1.42
Sfr1Q8BP27 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sfr1Q8BP27 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Sfr1Q8BP27 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
Sfr1Q8BP27 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sfr1Q8BP27 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Sfr1Q8BP27 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sfr1Q8BP27 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Sfr1Q8BP27 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sfr1Q8BP27 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Sfr1Q8BP27 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms