Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.83
Col16a1Q8BLX7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
Col16a1Q8BLX7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Col16a1Q8BLX7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Col16a1Q8BLX7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Col16a1Q8BLX7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Col16a1Q8BLX7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Col16a1Q8BLX7 Gm30023-201ENSMUST00000197970 889 ntBASIC32.67■■■□□ 2.82
Col16a1Q8BLX7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32.67■■■□□ 2.82
Col16a1Q8BLX7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Col16a1Q8BLX7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC32.66■■■□□ 2.82
Col16a1Q8BLX7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Col16a1Q8BLX7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC32.66■■■□□ 2.82
Col16a1Q8BLX7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Col16a1Q8BLX7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Col16a1Q8BLX7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC32.63■■■□□ 2.81
Col16a1Q8BLX7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
Col16a1Q8BLX7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Col16a1Q8BLX7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Col16a1Q8BLX7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC32.62■■■□□ 2.81
Col16a1Q8BLX7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC32.61■■■□□ 2.81
Col16a1Q8BLX7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Col16a1Q8BLX7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Col16a1Q8BLX7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
Col16a1Q8BLX7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC32.59■■■□□ 2.81
Col16a1Q8BLX7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
Col16a1Q8BLX7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Col16a1Q8BLX7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Col16a1Q8BLX7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Col16a1Q8BLX7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
Col16a1Q8BLX7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Col16a1Q8BLX7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Col16a1Q8BLX7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Col16a1Q8BLX7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Col16a1Q8BLX7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Col16a1Q8BLX7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Col16a1Q8BLX7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Col16a1Q8BLX7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
Col16a1Q8BLX7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC32.53■■■□□ 2.8
Col16a1Q8BLX7 Particl-201ENSMUST00000205370 1560 ntBASIC32.52■■■□□ 2.8
Col16a1Q8BLX7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Col16a1Q8BLX7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Col16a1Q8BLX7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Col16a1Q8BLX7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Col16a1Q8BLX7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Col16a1Q8BLX7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
Col16a1Q8BLX7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Col16a1Q8BLX7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Col16a1Q8BLX7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
Col16a1Q8BLX7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.78
Col16a1Q8BLX7 Pcf11-205ENSMUST00000208255 1720 ntBASIC32.44■■■□□ 2.78
Col16a1Q8BLX7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Col16a1Q8BLX7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Col16a1Q8BLX7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC32.44■■■□□ 2.78
Col16a1Q8BLX7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC32.44■■■□□ 2.78
Col16a1Q8BLX7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Col16a1Q8BLX7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Col16a1Q8BLX7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
Col16a1Q8BLX7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC32.43■■■□□ 2.78
Col16a1Q8BLX7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC32.42■■■□□ 2.78
Col16a1Q8BLX7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Col16a1Q8BLX7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Col16a1Q8BLX7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Col16a1Q8BLX7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Col16a1Q8BLX7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Col16a1Q8BLX7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Col16a1Q8BLX7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Col16a1Q8BLX7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Col16a1Q8BLX7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Col16a1Q8BLX7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Col16a1Q8BLX7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Col16a1Q8BLX7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Col16a1Q8BLX7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Col16a1Q8BLX7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC32.35■■■□□ 2.77
Col16a1Q8BLX7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Col16a1Q8BLX7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Col16a1Q8BLX7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Col16a1Q8BLX7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Col16a1Q8BLX7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Col16a1Q8BLX7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
Col16a1Q8BLX7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Col16a1Q8BLX7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Col16a1Q8BLX7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Col16a1Q8BLX7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
Col16a1Q8BLX7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC32.32■■■□□ 2.76
Col16a1Q8BLX7 Gm12366-201ENSMUST00000121722 873 ntBASIC32.32■■■□□ 2.76
Col16a1Q8BLX7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC32.32■■■□□ 2.76
Col16a1Q8BLX7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC32.32■■■□□ 2.76
Col16a1Q8BLX7 Gm5786-201ENSMUST00000085368 882 ntBASIC32.32■■■□□ 2.76
Col16a1Q8BLX7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC32.31■■■□□ 2.76
Col16a1Q8BLX7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
Col16a1Q8BLX7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Col16a1Q8BLX7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Col16a1Q8BLX7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Col16a1Q8BLX7 Scarna2-201ENSMUST00000157560 414 ntBASIC32.28■■■□□ 2.76
Col16a1Q8BLX7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Col16a1Q8BLX7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Col16a1Q8BLX7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Col16a1Q8BLX7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Col16a1Q8BLX7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms