Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srrm4Q8BKA3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srrm4Q8BKA3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Srrm4Q8BKA3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srrm4Q8BKA3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srrm4Q8BKA3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Srrm4Q8BKA3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Srrm4Q8BKA3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Srrm4Q8BKA3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Srrm4Q8BKA3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Srrm4Q8BKA3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Srrm4Q8BKA3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srrm4Q8BKA3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srrm4Q8BKA3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Srrm4Q8BKA3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srrm4Q8BKA3 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.71■□□□□ 0.91
Srrm4Q8BKA3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srrm4Q8BKA3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srrm4Q8BKA3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Srrm4Q8BKA3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srrm4Q8BKA3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm4Q8BKA3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Srrm4Q8BKA3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm4Q8BKA3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Srrm4Q8BKA3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm4Q8BKA3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srrm4Q8BKA3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Srrm4Q8BKA3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srrm4Q8BKA3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.67■□□□□ 0.9
Srrm4Q8BKA3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srrm4Q8BKA3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.67■□□□□ 0.9
Srrm4Q8BKA3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.67■□□□□ 0.9
Srrm4Q8BKA3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Srrm4Q8BKA3 Nkain2-201ENSMUST00000092602 558 ntBASIC20.66■□□□□ 0.9
Srrm4Q8BKA3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Srrm4Q8BKA3 Gm6821-201ENSMUST00000107540 542 ntBASIC20.65■□□□□ 0.9
Srrm4Q8BKA3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.65■□□□□ 0.9
Srrm4Q8BKA3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Srrm4Q8BKA3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Srrm4Q8BKA3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Srrm4Q8BKA3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Srrm4Q8BKA3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Srrm4Q8BKA3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Srrm4Q8BKA3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.64■□□□□ 0.89
Srrm4Q8BKA3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Srrm4Q8BKA3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Srrm4Q8BKA3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Srrm4Q8BKA3 Gm8503-201ENSMUST00000118131 455 ntBASIC20.63■□□□□ 0.89
Srrm4Q8BKA3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.62■□□□□ 0.89
Srrm4Q8BKA3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Srrm4Q8BKA3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm4Q8BKA3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.61■□□□□ 0.89
Srrm4Q8BKA3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Srrm4Q8BKA3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Srrm4Q8BKA3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.6■□□□□ 0.89
Srrm4Q8BKA3 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.59■□□□□ 0.89
Srrm4Q8BKA3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Srrm4Q8BKA3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Srrm4Q8BKA3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Srrm4Q8BKA3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
Srrm4Q8BKA3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Srrm4Q8BKA3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm4Q8BKA3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.56■□□□□ 0.88
Srrm4Q8BKA3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm4Q8BKA3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Srrm4Q8BKA3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.55■□□□□ 0.88
Srrm4Q8BKA3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Srrm4Q8BKA3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm4Q8BKA3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Srrm4Q8BKA3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.52■□□□□ 0.88
Srrm4Q8BKA3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm4Q8BKA3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm4Q8BKA3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
Srrm4Q8BKA3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.51■□□□□ 0.87
Srrm4Q8BKA3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srrm4Q8BKA3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srrm4Q8BKA3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Srrm4Q8BKA3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Srrm4Q8BKA3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm4Q8BKA3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Srrm4Q8BKA3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Srrm4Q8BKA3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Srrm4Q8BKA3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Srrm4Q8BKA3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Srrm4Q8BKA3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Srrm4Q8BKA3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Srrm4Q8BKA3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.47■□□□□ 0.87
Srrm4Q8BKA3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Srrm4Q8BKA3 Gm30023-201ENSMUST00000197970 889 ntBASIC20.47■□□□□ 0.87
Srrm4Q8BKA3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.47■□□□□ 0.87
Srrm4Q8BKA3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Srrm4Q8BKA3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Srrm4Q8BKA3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Srrm4Q8BKA3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Srrm4Q8BKA3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Srrm4Q8BKA3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Srrm4Q8BKA3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.43■□□□□ 0.86
Srrm4Q8BKA3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.43■□□□□ 0.86
Srrm4Q8BKA3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Srrm4Q8BKA3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 952.1 ms