Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Csnk1a1Q8BK63 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Csnk1a1Q8BK63 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.21■□□□□ 0.99
Csnk1a1Q8BK63 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Csnk1a1Q8BK63 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Csnk1a1Q8BK63 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Csnk1a1Q8BK63 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Csnk1a1Q8BK63 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.19■□□□□ 0.98
Csnk1a1Q8BK63 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Csnk1a1Q8BK63 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Csnk1a1Q8BK63 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Csnk1a1Q8BK63 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Csnk1a1Q8BK63 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.18■□□□□ 0.98
Csnk1a1Q8BK63 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Csnk1a1Q8BK63 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Csnk1a1Q8BK63 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Csnk1a1Q8BK63 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Csnk1a1Q8BK63 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Csnk1a1Q8BK63 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Csnk1a1Q8BK63 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Csnk1a1Q8BK63 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.13■□□□□ 0.97
Csnk1a1Q8BK63 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Csnk1a1Q8BK63 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Csnk1a1Q8BK63 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Csnk1a1Q8BK63 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Csnk1a1Q8BK63 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Csnk1a1Q8BK63 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Csnk1a1Q8BK63 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Csnk1a1Q8BK63 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Csnk1a1Q8BK63 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Csnk1a1Q8BK63 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Csnk1a1Q8BK63 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.1■□□□□ 0.97
Csnk1a1Q8BK63 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Csnk1a1Q8BK63 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Csnk1a1Q8BK63 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Csnk1a1Q8BK63 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.09■□□□□ 0.97
Csnk1a1Q8BK63 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Csnk1a1Q8BK63 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Csnk1a1Q8BK63 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Csnk1a1Q8BK63 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Csnk1a1Q8BK63 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Csnk1a1Q8BK63 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Csnk1a1Q8BK63 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Csnk1a1Q8BK63 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Csnk1a1Q8BK63 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Csnk1a1Q8BK63 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Csnk1a1Q8BK63 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.05■□□□□ 0.96
Csnk1a1Q8BK63 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.05■□□□□ 0.96
Csnk1a1Q8BK63 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Csnk1a1Q8BK63 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Csnk1a1Q8BK63 Gm30023-201ENSMUST00000197970 889 ntBASIC21.04■□□□□ 0.96
Csnk1a1Q8BK63 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.04■□□□□ 0.96
Csnk1a1Q8BK63 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Csnk1a1Q8BK63 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Csnk1a1Q8BK63 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.03■□□□□ 0.96
Csnk1a1Q8BK63 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.03■□□□□ 0.96
Csnk1a1Q8BK63 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Csnk1a1Q8BK63 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.01■□□□□ 0.95
Csnk1a1Q8BK63 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Csnk1a1Q8BK63 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Csnk1a1Q8BK63 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Csnk1a1Q8BK63 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Csnk1a1Q8BK63 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Csnk1a1Q8BK63 Nkain2-201ENSMUST00000092602 558 ntBASIC21■□□□□ 0.95
Csnk1a1Q8BK63 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Csnk1a1Q8BK63 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1a1Q8BK63 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1a1Q8BK63 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1a1Q8BK63 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Csnk1a1Q8BK63 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1a1Q8BK63 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Csnk1a1Q8BK63 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Csnk1a1Q8BK63 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Csnk1a1Q8BK63 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Csnk1a1Q8BK63 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Csnk1a1Q8BK63 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Csnk1a1Q8BK63 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Csnk1a1Q8BK63 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.97■□□□□ 0.95
Csnk1a1Q8BK63 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Csnk1a1Q8BK63 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Csnk1a1Q8BK63 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Csnk1a1Q8BK63 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.96■□□□□ 0.95
Csnk1a1Q8BK63 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Csnk1a1Q8BK63 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Csnk1a1Q8BK63 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Csnk1a1Q8BK63 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Csnk1a1Q8BK63 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
Csnk1a1Q8BK63 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Csnk1a1Q8BK63 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.94■□□□□ 0.94
Csnk1a1Q8BK63 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.94■□□□□ 0.94
Csnk1a1Q8BK63 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Csnk1a1Q8BK63 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Csnk1a1Q8BK63 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnk1a1Q8BK63 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Csnk1a1Q8BK63 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Csnk1a1Q8BK63 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Csnk1a1Q8BK63 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Csnk1a1Q8BK63 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Csnk1a1Q8BK63 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Csnk1a1Q8BK63 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms