Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23,54■■□□□ 1,36
Ubp1Q811S7 Nkain2-201ENSMUST00000092602 558 ntBASIC23,54■■□□□ 1,36
Ubp1Q811S7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23,54■■□□□ 1,36
Ubp1Q811S7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23,53■■□□□ 1,36
Ubp1Q811S7 Gm6821-201ENSMUST00000107540 542 ntBASIC23,53■■□□□ 1,36
Ubp1Q811S7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23,52■■□□□ 1,36
Ubp1Q811S7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23,51■■□□□ 1,35
Ubp1Q811S7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23,51■■□□□ 1,35
Ubp1Q811S7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23,51■■□□□ 1,35
Ubp1Q811S7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23,5■■□□□ 1,35
Ubp1Q811S7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23,5■■□□□ 1,35
Ubp1Q811S7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23,5■■□□□ 1,35
Ubp1Q811S7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23,49■■□□□ 1,35
Ubp1Q811S7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23,49■■□□□ 1,35
Ubp1Q811S7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Ubp1Q811S7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23,48■■□□□ 1,35
Ubp1Q811S7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23,48■■□□□ 1,35
Ubp1Q811S7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23,47■■□□□ 1,35
Ubp1Q811S7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23,47■■□□□ 1,35
Ubp1Q811S7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23,47■■□□□ 1,35
Ubp1Q811S7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23,47■■□□□ 1,35
Ubp1Q811S7 Gm30023-201ENSMUST00000197970 889 ntBASIC23,46■■□□□ 1,35
Ubp1Q811S7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23,46■■□□□ 1,35
Ubp1Q811S7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23,46■■□□□ 1,35
Ubp1Q811S7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23,45■■□□□ 1,35
Ubp1Q811S7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23,45■■□□□ 1,34
Ubp1Q811S7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23,44■■□□□ 1,34
Ubp1Q811S7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23,42■■□□□ 1,34
Ubp1Q811S7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23,42■■□□□ 1,34
Ubp1Q811S7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23,41■■□□□ 1,34
Ubp1Q811S7 Gm8503-201ENSMUST00000118131 455 ntBASIC23,4■■□□□ 1,34
Ubp1Q811S7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23,4■■□□□ 1,34
Ubp1Q811S7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23,4■■□□□ 1,34
Ubp1Q811S7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23,4■■□□□ 1,34
Ubp1Q811S7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23,39■■□□□ 1,34
Ubp1Q811S7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23,39■■□□□ 1,34
Ubp1Q811S7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23,39■■□□□ 1,33
Ubp1Q811S7 Fezf2-202ENSMUST00000224023 1917 ntBASIC23,39■■□□□ 1,33
Ubp1Q811S7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Ubp1Q811S7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Ubp1Q811S7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Ubp1Q811S7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23,38■■□□□ 1,33
Ubp1Q811S7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23,38■■□□□ 1,33
Ubp1Q811S7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23,38■■□□□ 1,33
Ubp1Q811S7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23,38■■□□□ 1,33
Ubp1Q811S7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Ubp1Q811S7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23,37■■□□□ 1,33
Ubp1Q811S7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23,37■■□□□ 1,33
Ubp1Q811S7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23,37■■□□□ 1,33
Ubp1Q811S7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23,36■■□□□ 1,33
Ubp1Q811S7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23,36■■□□□ 1,33
Ubp1Q811S7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23,36■■□□□ 1,33
Ubp1Q811S7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23,36■■□□□ 1,33
Ubp1Q811S7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23,36■■□□□ 1,33
Ubp1Q811S7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23,36■■□□□ 1,33
Ubp1Q811S7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23,35■■□□□ 1,33
Ubp1Q811S7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Ubp1Q811S7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23,35■■□□□ 1,33
Ubp1Q811S7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23,34■■□□□ 1,33
Ubp1Q811S7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Ubp1Q811S7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Ubp1Q811S7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23,33■■□□□ 1,33
Ubp1Q811S7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23,33■■□□□ 1,32
Ubp1Q811S7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23,32■■□□□ 1,32
Ubp1Q811S7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23,32■■□□□ 1,32
Ubp1Q811S7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23,31■■□□□ 1,32
Ubp1Q811S7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23,31■■□□□ 1,32
Ubp1Q811S7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23,31■■□□□ 1,32
Ubp1Q811S7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23,3■■□□□ 1,32
Ubp1Q811S7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23,3■■□□□ 1,32
Ubp1Q811S7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23,3■■□□□ 1,32
Ubp1Q811S7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23,3■■□□□ 1,32
Ubp1Q811S7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23,3■■□□□ 1,32
Ubp1Q811S7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23,3■■□□□ 1,32
Ubp1Q811S7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23,29■■□□□ 1,32
Ubp1Q811S7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23,29■■□□□ 1,32
Ubp1Q811S7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23,29■■□□□ 1,32
Ubp1Q811S7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23,29■■□□□ 1,32
Ubp1Q811S7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23,29■■□□□ 1,32
Ubp1Q811S7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23,28■■□□□ 1,32
Ubp1Q811S7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23,28■■□□□ 1,32
Ubp1Q811S7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23,28■■□□□ 1,32
Ubp1Q811S7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23,27■■□□□ 1,32
Ubp1Q811S7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23,26■■□□□ 1,31
Ubp1Q811S7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23,26■■□□□ 1,31
Ubp1Q811S7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23,26■■□□□ 1,31
Ubp1Q811S7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23,26■■□□□ 1,31
Ubp1Q811S7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23,26■■□□□ 1,31
Ubp1Q811S7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23,25■■□□□ 1,31
Ubp1Q811S7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23,25■■□□□ 1,31
Ubp1Q811S7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23,25■■□□□ 1,31
Ubp1Q811S7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23,24■■□□□ 1,31
Ubp1Q811S7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23,24■■□□□ 1,31
Ubp1Q811S7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23,24■■□□□ 1,31
Ubp1Q811S7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23,24■■□□□ 1,31
Ubp1Q811S7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23,24■■□□□ 1,31
Ubp1Q811S7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23,23■■□□□ 1,31
Ubp1Q811S7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23,22■■□□□ 1,31
Ubp1Q811S7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23,21■■□□□ 1,31
Ubp1Q811S7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23,2■■□□□ 1,3
Retrieved 100 of 76,532 protein–RNA pairs in 22,1 ms