Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim50Q810I2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.3■■□□□ 1.32
Trim50Q810I2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim50Q810I2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim50Q810I2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim50Q810I2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim50Q810I2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim50Q810I2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim50Q810I2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim50Q810I2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim50Q810I2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim50Q810I2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim50Q810I2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim50Q810I2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim50Q810I2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim50Q810I2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.23■■□□□ 1.31
Trim50Q810I2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim50Q810I2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim50Q810I2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim50Q810I2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim50Q810I2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim50Q810I2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim50Q810I2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Trim50Q810I2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trim50Q810I2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim50Q810I2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim50Q810I2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Trim50Q810I2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim50Q810I2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Trim50Q810I2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim50Q810I2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim50Q810I2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim50Q810I2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim50Q810I2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.14■■□□□ 1.29
Trim50Q810I2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trim50Q810I2 Gm30023-201ENSMUST00000197970 889 ntBASIC23.13■■□□□ 1.29
Trim50Q810I2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim50Q810I2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.13■■□□□ 1.29
Trim50Q810I2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim50Q810I2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.12■■□□□ 1.29
Trim50Q810I2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim50Q810I2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim50Q810I2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim50Q810I2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim50Q810I2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim50Q810I2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.11■■□□□ 1.29
Trim50Q810I2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim50Q810I2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim50Q810I2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Trim50Q810I2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim50Q810I2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim50Q810I2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim50Q810I2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.09■■□□□ 1.29
Trim50Q810I2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim50Q810I2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim50Q810I2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim50Q810I2 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.07■■□□□ 1.28
Trim50Q810I2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
Trim50Q810I2 Nkain2-201ENSMUST00000092602 558 ntBASIC23.07■■□□□ 1.28
Trim50Q810I2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim50Q810I2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Trim50Q810I2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim50Q810I2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
Trim50Q810I2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
Trim50Q810I2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim50Q810I2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Trim50Q810I2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim50Q810I2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim50Q810I2 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.04■■□□□ 1.28
Trim50Q810I2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim50Q810I2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Trim50Q810I2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.03■■□□□ 1.28
Trim50Q810I2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Trim50Q810I2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Trim50Q810I2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.03■■□□□ 1.28
Trim50Q810I2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim50Q810I2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim50Q810I2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim50Q810I2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim50Q810I2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim50Q810I2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim50Q810I2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim50Q810I2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim50Q810I2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim50Q810I2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Trim50Q810I2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
Trim50Q810I2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim50Q810I2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23■■□□□ 1.27
Trim50Q810I2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Trim50Q810I2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim50Q810I2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Trim50Q810I2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Trim50Q810I2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim50Q810I2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trim50Q810I2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim50Q810I2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim50Q810I2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.94■■□□□ 1.26
Trim50Q810I2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Trim50Q810I2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.93■■□□□ 1.26
Trim50Q810I2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms