Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Prdm4Q80V63 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Prdm4Q80V63 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Prdm4Q80V63 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Prdm4Q80V63 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Prdm4Q80V63 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
Prdm4Q80V63 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Prdm4Q80V63 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.64■■□□□ 1.54
Prdm4Q80V63 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Prdm4Q80V63 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Prdm4Q80V63 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
Prdm4Q80V63 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.64■■□□□ 1.53
Prdm4Q80V63 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Prdm4Q80V63 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Prdm4Q80V63 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Prdm4Q80V63 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Prdm4Q80V63 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Prdm4Q80V63 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Prdm4Q80V63 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Prdm4Q80V63 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Prdm4Q80V63 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Prdm4Q80V63 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Prdm4Q80V63 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Prdm4Q80V63 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Prdm4Q80V63 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Prdm4Q80V63 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Prdm4Q80V63 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Prdm4Q80V63 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Prdm4Q80V63 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Prdm4Q80V63 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Prdm4Q80V63 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Prdm4Q80V63 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Prdm4Q80V63 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Prdm4Q80V63 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.57■■□□□ 1.52
Prdm4Q80V63 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Prdm4Q80V63 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Prdm4Q80V63 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Prdm4Q80V63 Zfp131-205ENSMUST00000223812 663 ntBASIC24.56■■□□□ 1.52
Prdm4Q80V63 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Prdm4Q80V63 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Prdm4Q80V63 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Prdm4Q80V63 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.55■■□□□ 1.52
Prdm4Q80V63 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.55■■□□□ 1.52
Prdm4Q80V63 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Prdm4Q80V63 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Prdm4Q80V63 Gm16148-201ENSMUST00000119653 893 ntBASIC24.52■■□□□ 1.52
Prdm4Q80V63 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Prdm4Q80V63 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Prdm4Q80V63 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
Prdm4Q80V63 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Prdm4Q80V63 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
Prdm4Q80V63 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Prdm4Q80V63 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Prdm4Q80V63 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Prdm4Q80V63 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.49■■□□□ 1.51
Prdm4Q80V63 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.49■■□□□ 1.51
Prdm4Q80V63 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Prdm4Q80V63 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Prdm4Q80V63 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Prdm4Q80V63 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Prdm4Q80V63 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Prdm4Q80V63 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Prdm4Q80V63 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prdm4Q80V63 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prdm4Q80V63 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prdm4Q80V63 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Prdm4Q80V63 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Prdm4Q80V63 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Prdm4Q80V63 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Prdm4Q80V63 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.43■■□□□ 1.5
Prdm4Q80V63 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.43■■□□□ 1.5
Prdm4Q80V63 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prdm4Q80V63 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prdm4Q80V63 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prdm4Q80V63 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Prdm4Q80V63 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Prdm4Q80V63 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Prdm4Q80V63 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Prdm4Q80V63 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Prdm4Q80V63 Notumos-201ENSMUST00000151998 2659 ntBASIC24.4■■□□□ 1.5
Prdm4Q80V63 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prdm4Q80V63 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prdm4Q80V63 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Prdm4Q80V63 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Prdm4Q80V63 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Prdm4Q80V63 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Prdm4Q80V63 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Prdm4Q80V63 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Prdm4Q80V63 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Prdm4Q80V63 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Prdm4Q80V63 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Prdm4Q80V63 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.36■■□□□ 1.49
Prdm4Q80V63 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Prdm4Q80V63 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Prdm4Q80V63 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Prdm4Q80V63 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Prdm4Q80V63 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Prdm4Q80V63 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Prdm4Q80V63 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Prdm4Q80V63 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms