Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Pif1Q80SX8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pif1Q80SX8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pif1Q80SX8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pif1Q80SX8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pif1Q80SX8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pif1Q80SX8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pif1Q80SX8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.1■■□□□ 1.13
Pif1Q80SX8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pif1Q80SX8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pif1Q80SX8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pif1Q80SX8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.08■■□□□ 1.13
Pif1Q80SX8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pif1Q80SX8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pif1Q80SX8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.07■■□□□ 1.12
Pif1Q80SX8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pif1Q80SX8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pif1Q80SX8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pif1Q80SX8 Gm30023-201ENSMUST00000197970 889 ntBASIC22.06■■□□□ 1.12
Pif1Q80SX8 Gm6311-201ENSMUST00000073790 878 ntBASIC22.06■■□□□ 1.12
Pif1Q80SX8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pif1Q80SX8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pif1Q80SX8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pif1Q80SX8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pif1Q80SX8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pif1Q80SX8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pif1Q80SX8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.04■■□□□ 1.12
Pif1Q80SX8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Pif1Q80SX8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pif1Q80SX8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pif1Q80SX8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Pif1Q80SX8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Pif1Q80SX8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pif1Q80SX8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pif1Q80SX8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pif1Q80SX8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pif1Q80SX8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pif1Q80SX8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pif1Q80SX8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Pif1Q80SX8 Particl-201ENSMUST00000205370 1560 ntBASIC22■■□□□ 1.11
Pif1Q80SX8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pif1Q80SX8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Pif1Q80SX8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pif1Q80SX8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pif1Q80SX8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pif1Q80SX8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pif1Q80SX8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pif1Q80SX8 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.97■■□□□ 1.11
Pif1Q80SX8 Cap2-205ENSMUST00000225824 1634 ntBASIC21.96■■□□□ 1.11
Pif1Q80SX8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pif1Q80SX8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pif1Q80SX8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.96■■□□□ 1.11
Pif1Q80SX8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pif1Q80SX8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.94■■□□□ 1.1
Pif1Q80SX8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pif1Q80SX8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pif1Q80SX8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pif1Q80SX8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pif1Q80SX8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pif1Q80SX8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pif1Q80SX8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.93■■□□□ 1.1
Pif1Q80SX8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pif1Q80SX8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pif1Q80SX8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.92■■□□□ 1.1
Pif1Q80SX8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.92■■□□□ 1.1
Pif1Q80SX8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pif1Q80SX8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pif1Q80SX8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pif1Q80SX8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.9■■□□□ 1.1
Pif1Q80SX8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pif1Q80SX8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pif1Q80SX8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pif1Q80SX8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pif1Q80SX8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.87■■□□□ 1.09
Pif1Q80SX8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pif1Q80SX8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pif1Q80SX8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pif1Q80SX8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pif1Q80SX8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pif1Q80SX8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pif1Q80SX8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.85■■□□□ 1.09
Pif1Q80SX8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pif1Q80SX8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pif1Q80SX8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pif1Q80SX8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pif1Q80SX8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pif1Q80SX8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Pif1Q80SX8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pif1Q80SX8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Pif1Q80SX8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pif1Q80SX8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pif1Q80SX8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pif1Q80SX8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pif1Q80SX8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.8■■□□□ 1.08
Pif1Q80SX8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.79■■□□□ 1.08
Pif1Q80SX8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pif1Q80SX8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pif1Q80SX8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pif1Q80SX8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pif1Q80SX8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms