Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.11■■□□□ 1.13
Exosc3Q7TQK4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
Exosc3Q7TQK4 Nkain2-201ENSMUST00000092602 558 ntBASIC22.11■■□□□ 1.13
Exosc3Q7TQK4 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.11■■□□□ 1.13
Exosc3Q7TQK4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Exosc3Q7TQK4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Exosc3Q7TQK4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Exosc3Q7TQK4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.1■■□□□ 1.13
Exosc3Q7TQK4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Exosc3Q7TQK4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Exosc3Q7TQK4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.08■■□□□ 1.13
Exosc3Q7TQK4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Exosc3Q7TQK4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Exosc3Q7TQK4 Gm30023-201ENSMUST00000197970 889 ntBASIC22.07■■□□□ 1.12
Exosc3Q7TQK4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Exosc3Q7TQK4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Exosc3Q7TQK4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Exosc3Q7TQK4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Exosc3Q7TQK4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Exosc3Q7TQK4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Exosc3Q7TQK4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Exosc3Q7TQK4 Gm6821-201ENSMUST00000107540 542 ntBASIC22.04■■□□□ 1.12
Exosc3Q7TQK4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
Exosc3Q7TQK4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Exosc3Q7TQK4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Exosc3Q7TQK4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.03■■□□□ 1.12
Exosc3Q7TQK4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.03■■□□□ 1.12
Exosc3Q7TQK4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Exosc3Q7TQK4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Exosc3Q7TQK4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Exosc3Q7TQK4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Exosc3Q7TQK4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Exosc3Q7TQK4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Exosc3Q7TQK4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Exosc3Q7TQK4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Exosc3Q7TQK4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Exosc3Q7TQK4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Exosc3Q7TQK4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Exosc3Q7TQK4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Exosc3Q7TQK4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Exosc3Q7TQK4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Exosc3Q7TQK4 Gm8503-201ENSMUST00000118131 455 ntBASIC21.98■■□□□ 1.11
Exosc3Q7TQK4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Exosc3Q7TQK4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Exosc3Q7TQK4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Exosc3Q7TQK4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Exosc3Q7TQK4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
Exosc3Q7TQK4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Exosc3Q7TQK4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Exosc3Q7TQK4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Exosc3Q7TQK4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Exosc3Q7TQK4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Exosc3Q7TQK4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Exosc3Q7TQK4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.94■■□□□ 1.1
Exosc3Q7TQK4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Exosc3Q7TQK4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.93■■□□□ 1.1
Exosc3Q7TQK4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Exosc3Q7TQK4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Exosc3Q7TQK4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Exosc3Q7TQK4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Exosc3Q7TQK4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Exosc3Q7TQK4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.91■■□□□ 1.1
Exosc3Q7TQK4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.91■■□□□ 1.1
Exosc3Q7TQK4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Exosc3Q7TQK4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.91■■□□□ 1.1
Exosc3Q7TQK4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Exosc3Q7TQK4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Exosc3Q7TQK4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.9■■□□□ 1.1
Exosc3Q7TQK4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Exosc3Q7TQK4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.89■■□□□ 1.09
Exosc3Q7TQK4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Exosc3Q7TQK4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.88■■□□□ 1.09
Exosc3Q7TQK4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Exosc3Q7TQK4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.87■■□□□ 1.09
Exosc3Q7TQK4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Exosc3Q7TQK4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.87■■□□□ 1.09
Exosc3Q7TQK4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.86■■□□□ 1.09
Exosc3Q7TQK4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Exosc3Q7TQK4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.86■■□□□ 1.09
Exosc3Q7TQK4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.85■■□□□ 1.09
Exosc3Q7TQK4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Exosc3Q7TQK4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Exosc3Q7TQK4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Exosc3Q7TQK4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Exosc3Q7TQK4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Exosc3Q7TQK4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Exosc3Q7TQK4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.8■■□□□ 1.08
Exosc3Q7TQK4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.8■■□□□ 1.08
Exosc3Q7TQK4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Exosc3Q7TQK4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Exosc3Q7TQK4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Exosc3Q7TQK4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.79■■□□□ 1.08
Exosc3Q7TQK4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Exosc3Q7TQK4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Exosc3Q7TQK4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Exosc3Q7TQK4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Exosc3Q7TQK4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Exosc3Q7TQK4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Exosc3Q7TQK4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Exosc3Q7TQK4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms