Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Otub1Q7TQI3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Otub1Q7TQI3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Otub1Q7TQI3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Otub1Q7TQI3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Otub1Q7TQI3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Otub1Q7TQI3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Otub1Q7TQI3 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.56■■□□□ 1.2
Otub1Q7TQI3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Otub1Q7TQI3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Otub1Q7TQI3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.55■■□□□ 1.2
Otub1Q7TQI3 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.55■■□□□ 1.2
Otub1Q7TQI3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Otub1Q7TQI3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.54■■□□□ 1.2
Otub1Q7TQI3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Otub1Q7TQI3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Otub1Q7TQI3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Otub1Q7TQI3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.51■■□□□ 1.19
Otub1Q7TQI3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Otub1Q7TQI3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Otub1Q7TQI3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
Otub1Q7TQI3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Otub1Q7TQI3 Gm24970-201ENSMUST00000175582 82 ntBASIC22.5■■□□□ 1.19
Otub1Q7TQI3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Otub1Q7TQI3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Otub1Q7TQI3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Otub1Q7TQI3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Otub1Q7TQI3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Otub1Q7TQI3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Otub1Q7TQI3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Otub1Q7TQI3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Otub1Q7TQI3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Otub1Q7TQI3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
Otub1Q7TQI3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.44■■□□□ 1.18
Otub1Q7TQI3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Otub1Q7TQI3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Otub1Q7TQI3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Otub1Q7TQI3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Otub1Q7TQI3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Otub1Q7TQI3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Otub1Q7TQI3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.42■■□□□ 1.18
Otub1Q7TQI3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Otub1Q7TQI3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Otub1Q7TQI3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Otub1Q7TQI3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Otub1Q7TQI3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Otub1Q7TQI3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Otub1Q7TQI3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.41■■□□□ 1.18
Otub1Q7TQI3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Otub1Q7TQI3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Otub1Q7TQI3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Otub1Q7TQI3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Otub1Q7TQI3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Otub1Q7TQI3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Otub1Q7TQI3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Otub1Q7TQI3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.38■■□□□ 1.17
Otub1Q7TQI3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Otub1Q7TQI3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Otub1Q7TQI3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Otub1Q7TQI3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Otub1Q7TQI3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Otub1Q7TQI3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Otub1Q7TQI3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Otub1Q7TQI3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Otub1Q7TQI3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Otub1Q7TQI3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Otub1Q7TQI3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Otub1Q7TQI3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Otub1Q7TQI3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Otub1Q7TQI3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Otub1Q7TQI3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.31■■□□□ 1.16
Otub1Q7TQI3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.31■■□□□ 1.16
Otub1Q7TQI3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Otub1Q7TQI3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Otub1Q7TQI3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Otub1Q7TQI3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.31■■□□□ 1.16
Otub1Q7TQI3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Otub1Q7TQI3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Otub1Q7TQI3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Otub1Q7TQI3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Otub1Q7TQI3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Otub1Q7TQI3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Otub1Q7TQI3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Otub1Q7TQI3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Otub1Q7TQI3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Otub1Q7TQI3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Otub1Q7TQI3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Otub1Q7TQI3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.25■■□□□ 1.15
Otub1Q7TQI3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Otub1Q7TQI3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Otub1Q7TQI3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Otub1Q7TQI3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Otub1Q7TQI3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Otub1Q7TQI3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Otub1Q7TQI3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Otub1Q7TQI3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Otub1Q7TQI3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Otub1Q7TQI3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Otub1Q7TQI3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Otub1Q7TQI3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms