Protein–RNA interactions for Protein: Q6PGK3

2700097O09Rik, RIKEN cDNA 2700097O09, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2700097O09RikQ6PGK3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.71■■□□□ 1.55
2700097O09RikQ6PGK3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
2700097O09RikQ6PGK3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
2700097O09RikQ6PGK3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
2700097O09RikQ6PGK3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
2700097O09RikQ6PGK3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
2700097O09RikQ6PGK3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.69■■□□□ 1.54
2700097O09RikQ6PGK3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
2700097O09RikQ6PGK3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
2700097O09RikQ6PGK3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
2700097O09RikQ6PGK3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
2700097O09RikQ6PGK3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
2700097O09RikQ6PGK3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
2700097O09RikQ6PGK3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
2700097O09RikQ6PGK3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
2700097O09RikQ6PGK3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
2700097O09RikQ6PGK3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
2700097O09RikQ6PGK3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
2700097O09RikQ6PGK3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
2700097O09RikQ6PGK3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.63■■□□□ 1.53
2700097O09RikQ6PGK3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
2700097O09RikQ6PGK3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
2700097O09RikQ6PGK3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
2700097O09RikQ6PGK3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
2700097O09RikQ6PGK3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
2700097O09RikQ6PGK3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
2700097O09RikQ6PGK3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
2700097O09RikQ6PGK3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
2700097O09RikQ6PGK3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
2700097O09RikQ6PGK3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
2700097O09RikQ6PGK3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
2700097O09RikQ6PGK3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
2700097O09RikQ6PGK3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
2700097O09RikQ6PGK3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.59■■□□□ 1.53
2700097O09RikQ6PGK3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
2700097O09RikQ6PGK3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.58■■□□□ 1.53
2700097O09RikQ6PGK3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
2700097O09RikQ6PGK3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
2700097O09RikQ6PGK3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
2700097O09RikQ6PGK3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
2700097O09RikQ6PGK3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
2700097O09RikQ6PGK3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
2700097O09RikQ6PGK3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
2700097O09RikQ6PGK3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
2700097O09RikQ6PGK3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
2700097O09RikQ6PGK3 Gm30023-201ENSMUST00000197970 889 ntBASIC24.55■■□□□ 1.52
2700097O09RikQ6PGK3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.55■■□□□ 1.52
2700097O09RikQ6PGK3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
2700097O09RikQ6PGK3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
2700097O09RikQ6PGK3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
2700097O09RikQ6PGK3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
2700097O09RikQ6PGK3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
2700097O09RikQ6PGK3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.53■■□□□ 1.52
2700097O09RikQ6PGK3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
2700097O09RikQ6PGK3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
2700097O09RikQ6PGK3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
2700097O09RikQ6PGK3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
2700097O09RikQ6PGK3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
2700097O09RikQ6PGK3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
2700097O09RikQ6PGK3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
2700097O09RikQ6PGK3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
2700097O09RikQ6PGK3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
2700097O09RikQ6PGK3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.5■■□□□ 1.51
2700097O09RikQ6PGK3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.49■■□□□ 1.51
2700097O09RikQ6PGK3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.49■■□□□ 1.51
2700097O09RikQ6PGK3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
2700097O09RikQ6PGK3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
2700097O09RikQ6PGK3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
2700097O09RikQ6PGK3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
2700097O09RikQ6PGK3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
2700097O09RikQ6PGK3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.47■■□□□ 1.51
2700097O09RikQ6PGK3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.46■■□□□ 1.51
2700097O09RikQ6PGK3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
2700097O09RikQ6PGK3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
2700097O09RikQ6PGK3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
2700097O09RikQ6PGK3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
2700097O09RikQ6PGK3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
2700097O09RikQ6PGK3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
2700097O09RikQ6PGK3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.44■■□□□ 1.5
2700097O09RikQ6PGK3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
2700097O09RikQ6PGK3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
2700097O09RikQ6PGK3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
2700097O09RikQ6PGK3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.43■■□□□ 1.5
2700097O09RikQ6PGK3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
2700097O09RikQ6PGK3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
2700097O09RikQ6PGK3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.42■■□□□ 1.5
2700097O09RikQ6PGK3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
2700097O09RikQ6PGK3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
2700097O09RikQ6PGK3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
2700097O09RikQ6PGK3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
2700097O09RikQ6PGK3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
2700097O09RikQ6PGK3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
2700097O09RikQ6PGK3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
2700097O09RikQ6PGK3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.49
2700097O09RikQ6PGK3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
2700097O09RikQ6PGK3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
2700097O09RikQ6PGK3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
2700097O09RikQ6PGK3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
2700097O09RikQ6PGK3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
2700097O09RikQ6PGK3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms