Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Zfp248Q640N4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.05■□□□□ 0.48
Zfp248Q640N4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.05■□□□□ 0.48
Zfp248Q640N4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Zfp248Q640N4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zfp248Q640N4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Zfp248Q640N4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zfp248Q640N4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zfp248Q640N4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Zfp248Q640N4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zfp248Q640N4 Gm24970-201ENSMUST00000175582 82 ntBASIC18.03■□□□□ 0.48
Zfp248Q640N4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Zfp248Q640N4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zfp248Q640N4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zfp248Q640N4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zfp248Q640N4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.01■□□□□ 0.47
Zfp248Q640N4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.01■□□□□ 0.47
Zfp248Q640N4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Zfp248Q640N4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zfp248Q640N4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18■□□□□ 0.47
Zfp248Q640N4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Zfp248Q640N4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zfp248Q640N4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zfp248Q640N4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18■□□□□ 0.47
Zfp248Q640N4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zfp248Q640N4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Zfp248Q640N4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zfp248Q640N4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.99■□□□□ 0.47
Zfp248Q640N4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zfp248Q640N4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Zfp248Q640N4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zfp248Q640N4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Zfp248Q640N4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Zfp248Q640N4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.98■□□□□ 0.47
Zfp248Q640N4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Zfp248Q640N4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zfp248Q640N4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zfp248Q640N4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.96■□□□□ 0.47
Zfp248Q640N4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Zfp248Q640N4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.96■□□□□ 0.47
Zfp248Q640N4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zfp248Q640N4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zfp248Q640N4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Zfp248Q640N4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Zfp248Q640N4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zfp248Q640N4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zfp248Q640N4 Gm45855-201ENSMUST00000212546 880 ntBASIC17.95■□□□□ 0.46
Zfp248Q640N4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Zfp248Q640N4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Zfp248Q640N4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zfp248Q640N4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Zfp248Q640N4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zfp248Q640N4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.93■□□□□ 0.46
Zfp248Q640N4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zfp248Q640N4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zfp248Q640N4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zfp248Q640N4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zfp248Q640N4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Zfp248Q640N4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Zfp248Q640N4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Zfp248Q640N4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zfp248Q640N4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zfp248Q640N4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Zfp248Q640N4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.91■□□□□ 0.46
Zfp248Q640N4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Zfp248Q640N4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.9■□□□□ 0.46
Zfp248Q640N4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zfp248Q640N4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.9■□□□□ 0.46
Zfp248Q640N4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zfp248Q640N4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zfp248Q640N4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zfp248Q640N4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zfp248Q640N4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zfp248Q640N4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zfp248Q640N4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.88■□□□□ 0.45
Zfp248Q640N4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zfp248Q640N4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zfp248Q640N4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zfp248Q640N4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Zfp248Q640N4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zfp248Q640N4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Zfp248Q640N4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Zfp248Q640N4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Zfp248Q640N4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zfp248Q640N4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zfp248Q640N4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zfp248Q640N4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zfp248Q640N4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Zfp248Q640N4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zfp248Q640N4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zfp248Q640N4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Zfp248Q640N4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zfp248Q640N4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Zfp248Q640N4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Zfp248Q640N4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Zfp248Q640N4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.84■□□□□ 0.45
Zfp248Q640N4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zfp248Q640N4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
Zfp248Q640N4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Zfp248Q640N4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms