Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ptp4a1Q63739 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptp4a1Q63739 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ptp4a1Q63739 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptp4a1Q63739 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ptp4a1Q63739 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptp4a1Q63739 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.49■■□□□ 1.03
Ptp4a1Q63739 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.49■■□□□ 1.03
Ptp4a1Q63739 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptp4a1Q63739 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptp4a1Q63739 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Ptp4a1Q63739 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.44■■□□□ 1.02
Ptp4a1Q63739 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptp4a1Q63739 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptp4a1Q63739 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.43■■□□□ 1.02
Ptp4a1Q63739 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptp4a1Q63739 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ptp4a1Q63739 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptp4a1Q63739 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.41■■□□□ 1.02
Ptp4a1Q63739 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ptp4a1Q63739 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ptp4a1Q63739 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptp4a1Q63739 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptp4a1Q63739 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptp4a1Q63739 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptp4a1Q63739 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptp4a1Q63739 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptp4a1Q63739 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ptp4a1Q63739 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptp4a1Q63739 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.34■■□□□ 1.01
Ptp4a1Q63739 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptp4a1Q63739 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ptp4a1Q63739 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.31■■□□□ 1
Ptp4a1Q63739 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptp4a1Q63739 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ptp4a1Q63739 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptp4a1Q63739 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptp4a1Q63739 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.29■■□□□ 1
Ptp4a1Q63739 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Ptp4a1Q63739 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.28■■□□□ 1
Ptp4a1Q63739 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.28■■□□□ 1
Ptp4a1Q63739 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptp4a1Q63739 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ptp4a1Q63739 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ptp4a1Q63739 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ptp4a1Q63739 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptp4a1Q63739 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Ptp4a1Q63739 Gm9397-201ENSMUST00000200125 605 ntBASIC21.25■□□□□ 0.99
Ptp4a1Q63739 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptp4a1Q63739 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Ptp4a1Q63739 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptp4a1Q63739 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptp4a1Q63739 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ptp4a1Q63739 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptp4a1Q63739 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptp4a1Q63739 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ptp4a1Q63739 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ptp4a1Q63739 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ptp4a1Q63739 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptp4a1Q63739 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ptp4a1Q63739 Gm45855-201ENSMUST00000212546 880 ntBASIC21.2■□□□□ 0.98
Ptp4a1Q63739 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ptp4a1Q63739 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ptp4a1Q63739 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.19■□□□□ 0.98
Ptp4a1Q63739 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.19■□□□□ 0.98
Ptp4a1Q63739 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptp4a1Q63739 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptp4a1Q63739 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ptp4a1Q63739 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ptp4a1Q63739 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ptp4a1Q63739 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptp4a1Q63739 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.16■□□□□ 0.98
Ptp4a1Q63739 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ptp4a1Q63739 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms