Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.49■□□□□ 0.87
Hes3Q61657 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.49■□□□□ 0.87
Hes3Q61657 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hes3Q61657 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hes3Q61657 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.48■□□□□ 0.87
Hes3Q61657 Zfp131-205ENSMUST00000223812 663 ntBASIC20.48■□□□□ 0.87
Hes3Q61657 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Hes3Q61657 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hes3Q61657 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hes3Q61657 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Hes3Q61657 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hes3Q61657 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hes3Q61657 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hes3Q61657 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hes3Q61657 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hes3Q61657 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hes3Q61657 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.45■□□□□ 0.86
Hes3Q61657 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.45■□□□□ 0.86
Hes3Q61657 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hes3Q61657 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Hes3Q61657 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hes3Q61657 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hes3Q61657 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hes3Q61657 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.43■□□□□ 0.86
Hes3Q61657 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hes3Q61657 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hes3Q61657 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hes3Q61657 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hes3Q61657 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Hes3Q61657 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hes3Q61657 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hes3Q61657 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.4■□□□□ 0.86
Hes3Q61657 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.4■□□□□ 0.86
Hes3Q61657 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Hes3Q61657 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hes3Q61657 Gm9397-201ENSMUST00000200125 605 ntBASIC20.39■□□□□ 0.85
Hes3Q61657 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hes3Q61657 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hes3Q61657 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hes3Q61657 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hes3Q61657 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hes3Q61657 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hes3Q61657 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hes3Q61657 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hes3Q61657 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.36■□□□□ 0.85
Hes3Q61657 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hes3Q61657 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hes3Q61657 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hes3Q61657 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.35■□□□□ 0.85
Hes3Q61657 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hes3Q61657 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.35■□□□□ 0.85
Hes3Q61657 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hes3Q61657 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hes3Q61657 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hes3Q61657 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hes3Q61657 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.34■□□□□ 0.85
Hes3Q61657 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hes3Q61657 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hes3Q61657 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hes3Q61657 Gm45855-201ENSMUST00000212546 880 ntBASIC20.32■□□□□ 0.84
Hes3Q61657 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.32■□□□□ 0.84
Hes3Q61657 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.32■□□□□ 0.84
Hes3Q61657 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hes3Q61657 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hes3Q61657 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hes3Q61657 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hes3Q61657 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hes3Q61657 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.29■□□□□ 0.84
Hes3Q61657 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hes3Q61657 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hes3Q61657 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hes3Q61657 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hes3Q61657 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hes3Q61657 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hes3Q61657 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.27■□□□□ 0.84
Hes3Q61657 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hes3Q61657 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Hes3Q61657 Gm24970-201ENSMUST00000175582 82 ntBASIC20.27■□□□□ 0.84
Hes3Q61657 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hes3Q61657 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hes3Q61657 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Hes3Q61657 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Hes3Q61657 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hes3Q61657 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hes3Q61657 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hes3Q61657 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hes3Q61657 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hes3Q61657 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hes3Q61657 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hes3Q61657 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hes3Q61657 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hes3Q61657 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hes3Q61657 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hes3Q61657 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hes3Q61657 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Hes3Q61657 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Hes3Q61657 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Hes3Q61657 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.23■□□□□ 0.83
Hes3Q61657 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hes3Q61657 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms