Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rc3h1Q4VGL6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
Rc3h1Q4VGL6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rc3h1Q4VGL6 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.17■■■□□ 2.1
Rc3h1Q4VGL6 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.16■■■□□ 2.1
Rc3h1Q4VGL6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.16■■■□□ 2.1
Rc3h1Q4VGL6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rc3h1Q4VGL6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rc3h1Q4VGL6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
Rc3h1Q4VGL6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.13■■■□□ 2.09
Rc3h1Q4VGL6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Rc3h1Q4VGL6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.13■■■□□ 2.09
Rc3h1Q4VGL6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rc3h1Q4VGL6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.11■■■□□ 2.09
Rc3h1Q4VGL6 Gm7432-201ENSMUST00000210343 879 ntBASIC28.11■■■□□ 2.09
Rc3h1Q4VGL6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Rc3h1Q4VGL6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.09■■■□□ 2.09
Rc3h1Q4VGL6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Rc3h1Q4VGL6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rc3h1Q4VGL6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Rc3h1Q4VGL6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rc3h1Q4VGL6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Rc3h1Q4VGL6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Rc3h1Q4VGL6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Rc3h1Q4VGL6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Rc3h1Q4VGL6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Rc3h1Q4VGL6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.02■■■□□ 2.08
Rc3h1Q4VGL6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
Rc3h1Q4VGL6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rc3h1Q4VGL6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rc3h1Q4VGL6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28■■■□□ 2.07
Rc3h1Q4VGL6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28■■■□□ 2.07
Rc3h1Q4VGL6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28■■■□□ 2.07
Rc3h1Q4VGL6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rc3h1Q4VGL6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.99■■■□□ 2.07
Rc3h1Q4VGL6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rc3h1Q4VGL6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rc3h1Q4VGL6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Rc3h1Q4VGL6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.98■■■□□ 2.07
Rc3h1Q4VGL6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Rc3h1Q4VGL6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Rc3h1Q4VGL6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.96■■■□□ 2.07
Rc3h1Q4VGL6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Rc3h1Q4VGL6 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.96■■■□□ 2.07
Rc3h1Q4VGL6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Rc3h1Q4VGL6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Rc3h1Q4VGL6 Gm11599-201ENSMUST00000118720 878 ntBASIC27.95■■■□□ 2.06
Rc3h1Q4VGL6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rc3h1Q4VGL6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.94■■■□□ 2.06
Rc3h1Q4VGL6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.94■■■□□ 2.06
Rc3h1Q4VGL6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.93■■■□□ 2.06
Rc3h1Q4VGL6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Rc3h1Q4VGL6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
Rc3h1Q4VGL6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Rc3h1Q4VGL6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Rc3h1Q4VGL6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.89■■■□□ 2.06
Rc3h1Q4VGL6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Rc3h1Q4VGL6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Rc3h1Q4VGL6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
Rc3h1Q4VGL6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Rc3h1Q4VGL6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
Rc3h1Q4VGL6 Amer2-203ENSMUST00000225247 2662 ntBASIC27.87■■■□□ 2.05
Rc3h1Q4VGL6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Rc3h1Q4VGL6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Rc3h1Q4VGL6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.87■■■□□ 2.05
Rc3h1Q4VGL6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Rc3h1Q4VGL6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Rc3h1Q4VGL6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Rc3h1Q4VGL6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rc3h1Q4VGL6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Rc3h1Q4VGL6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rc3h1Q4VGL6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Rc3h1Q4VGL6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rc3h1Q4VGL6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Rc3h1Q4VGL6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rc3h1Q4VGL6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rc3h1Q4VGL6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rc3h1Q4VGL6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rc3h1Q4VGL6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.79■■■□□ 2.04
Rc3h1Q4VGL6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Rc3h1Q4VGL6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rc3h1Q4VGL6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Rc3h1Q4VGL6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rc3h1Q4VGL6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Rc3h1Q4VGL6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rc3h1Q4VGL6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
Rc3h1Q4VGL6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Rc3h1Q4VGL6 Particl-201ENSMUST00000205370 1560 ntBASIC27.74■■■□□ 2.03
Rc3h1Q4VGL6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.73■■■□□ 2.03
Rc3h1Q4VGL6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Rc3h1Q4VGL6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Rc3h1Q4VGL6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Rc3h1Q4VGL6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.71■■■□□ 2.03
Rc3h1Q4VGL6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Rc3h1Q4VGL6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rc3h1Q4VGL6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.68■■■□□ 2.02
Rc3h1Q4VGL6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.67■■■□□ 2.02
Rc3h1Q4VGL6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rc3h1Q4VGL6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rc3h1Q4VGL6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms