Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Smcr8Q3UMB5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Smcr8Q3UMB5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
Smcr8Q3UMB5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.81■■□□□ 1.72
Smcr8Q3UMB5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Smcr8Q3UMB5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Smcr8Q3UMB5 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.8■■□□□ 1.72
Smcr8Q3UMB5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
Smcr8Q3UMB5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Smcr8Q3UMB5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Smcr8Q3UMB5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Smcr8Q3UMB5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.79■■□□□ 1.72
Smcr8Q3UMB5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Smcr8Q3UMB5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.77■■□□□ 1.72
Smcr8Q3UMB5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Smcr8Q3UMB5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Smcr8Q3UMB5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.75■■□□□ 1.71
Smcr8Q3UMB5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Smcr8Q3UMB5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Smcr8Q3UMB5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Smcr8Q3UMB5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Smcr8Q3UMB5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Smcr8Q3UMB5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Smcr8Q3UMB5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Smcr8Q3UMB5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Smcr8Q3UMB5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Smcr8Q3UMB5 Gm30023-201ENSMUST00000197970 889 ntBASIC25.72■■□□□ 1.71
Smcr8Q3UMB5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Smcr8Q3UMB5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Smcr8Q3UMB5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Smcr8Q3UMB5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Smcr8Q3UMB5 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.69■■□□□ 1.7
Smcr8Q3UMB5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Smcr8Q3UMB5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.69■■□□□ 1.7
Smcr8Q3UMB5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Smcr8Q3UMB5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.68■■□□□ 1.7
Smcr8Q3UMB5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Smcr8Q3UMB5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Smcr8Q3UMB5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Smcr8Q3UMB5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Smcr8Q3UMB5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Smcr8Q3UMB5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Smcr8Q3UMB5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Smcr8Q3UMB5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Smcr8Q3UMB5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Smcr8Q3UMB5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Smcr8Q3UMB5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Smcr8Q3UMB5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Smcr8Q3UMB5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Smcr8Q3UMB5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Smcr8Q3UMB5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Smcr8Q3UMB5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.63■■□□□ 1.69
Smcr8Q3UMB5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.61■■□□□ 1.69
Smcr8Q3UMB5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Smcr8Q3UMB5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smcr8Q3UMB5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smcr8Q3UMB5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Smcr8Q3UMB5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.57■■□□□ 1.68
Smcr8Q3UMB5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Smcr8Q3UMB5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.57■■□□□ 1.68
Smcr8Q3UMB5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Smcr8Q3UMB5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.56■■□□□ 1.68
Smcr8Q3UMB5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Smcr8Q3UMB5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smcr8Q3UMB5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smcr8Q3UMB5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smcr8Q3UMB5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.54■■□□□ 1.68
Smcr8Q3UMB5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Smcr8Q3UMB5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Smcr8Q3UMB5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.53■■□□□ 1.68
Smcr8Q3UMB5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.53■■□□□ 1.68
Smcr8Q3UMB5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Smcr8Q3UMB5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Smcr8Q3UMB5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
Smcr8Q3UMB5 Amer2-203ENSMUST00000225247 2662 ntBASIC25.52■■□□□ 1.68
Smcr8Q3UMB5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Smcr8Q3UMB5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Smcr8Q3UMB5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Smcr8Q3UMB5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Smcr8Q3UMB5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.68
Smcr8Q3UMB5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Smcr8Q3UMB5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Smcr8Q3UMB5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Smcr8Q3UMB5 Particl-201ENSMUST00000205370 1560 ntBASIC25.51■■□□□ 1.67
Smcr8Q3UMB5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smcr8Q3UMB5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Smcr8Q3UMB5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.49■■□□□ 1.67
Smcr8Q3UMB5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smcr8Q3UMB5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smcr8Q3UMB5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smcr8Q3UMB5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.47■■□□□ 1.67
Smcr8Q3UMB5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Smcr8Q3UMB5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Smcr8Q3UMB5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Smcr8Q3UMB5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Smcr8Q3UMB5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smcr8Q3UMB5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Smcr8Q3UMB5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Smcr8Q3UMB5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Smcr8Q3UMB5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms