Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim6Q3U0I6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.63■□□□□ 0.57
Smim6Q3U0I6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim6Q3U0I6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Smim6Q3U0I6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim6Q3U0I6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim6Q3U0I6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim6Q3U0I6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smim6Q3U0I6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim6Q3U0I6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smim6Q3U0I6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim6Q3U0I6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim6Q3U0I6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim6Q3U0I6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.58■□□□□ 0.57
Smim6Q3U0I6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smim6Q3U0I6 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.58■□□□□ 0.57
Smim6Q3U0I6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smim6Q3U0I6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smim6Q3U0I6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim6Q3U0I6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Smim6Q3U0I6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smim6Q3U0I6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Smim6Q3U0I6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smim6Q3U0I6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smim6Q3U0I6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Smim6Q3U0I6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smim6Q3U0I6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim6Q3U0I6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim6Q3U0I6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smim6Q3U0I6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smim6Q3U0I6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smim6Q3U0I6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.53■□□□□ 0.56
Smim6Q3U0I6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim6Q3U0I6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Smim6Q3U0I6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smim6Q3U0I6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smim6Q3U0I6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smim6Q3U0I6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Smim6Q3U0I6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim6Q3U0I6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Smim6Q3U0I6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim6Q3U0I6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim6Q3U0I6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smim6Q3U0I6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smim6Q3U0I6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim6Q3U0I6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim6Q3U0I6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim6Q3U0I6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim6Q3U0I6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Smim6Q3U0I6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim6Q3U0I6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.48■□□□□ 0.55
Smim6Q3U0I6 Gm25262-201ENSMUST00000174934 133 ntBASIC18.48■□□□□ 0.55
Smim6Q3U0I6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Smim6Q3U0I6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim6Q3U0I6 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.46■□□□□ 0.55
Smim6Q3U0I6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Smim6Q3U0I6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smim6Q3U0I6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smim6Q3U0I6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Smim6Q3U0I6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smim6Q3U0I6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smim6Q3U0I6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smim6Q3U0I6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Smim6Q3U0I6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smim6Q3U0I6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smim6Q3U0I6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smim6Q3U0I6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smim6Q3U0I6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smim6Q3U0I6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim6Q3U0I6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Smim6Q3U0I6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim6Q3U0I6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smim6Q3U0I6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim6Q3U0I6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim6Q3U0I6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim6Q3U0I6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Smim6Q3U0I6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim6Q3U0I6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smim6Q3U0I6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smim6Q3U0I6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smim6Q3U0I6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim6Q3U0I6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smim6Q3U0I6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smim6Q3U0I6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smim6Q3U0I6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smim6Q3U0I6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim6Q3U0I6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim6Q3U0I6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim6Q3U0I6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.38■□□□□ 0.53
Smim6Q3U0I6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smim6Q3U0I6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.38■□□□□ 0.53
Smim6Q3U0I6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim6Q3U0I6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smim6Q3U0I6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smim6Q3U0I6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smim6Q3U0I6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim6Q3U0I6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim6Q3U0I6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim6Q3U0I6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim6Q3U0I6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms