Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Nhej1Q3KNJ2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Nhej1Q3KNJ2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Nhej1Q3KNJ2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.46■■□□□ 1.67
Nhej1Q3KNJ2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Nhej1Q3KNJ2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Nhej1Q3KNJ2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Nhej1Q3KNJ2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Nhej1Q3KNJ2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.45■■□□□ 1.66
Nhej1Q3KNJ2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Nhej1Q3KNJ2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Nhej1Q3KNJ2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Nhej1Q3KNJ2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Nhej1Q3KNJ2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
Nhej1Q3KNJ2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Nhej1Q3KNJ2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Nhej1Q3KNJ2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.42■■□□□ 1.66
Nhej1Q3KNJ2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Nhej1Q3KNJ2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Nhej1Q3KNJ2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Nhej1Q3KNJ2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Nhej1Q3KNJ2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Nhej1Q3KNJ2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Nhej1Q3KNJ2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Nhej1Q3KNJ2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Nhej1Q3KNJ2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Nhej1Q3KNJ2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Nhej1Q3KNJ2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Nhej1Q3KNJ2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Nhej1Q3KNJ2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
Nhej1Q3KNJ2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Nhej1Q3KNJ2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Nhej1Q3KNJ2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Nhej1Q3KNJ2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Nhej1Q3KNJ2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Nhej1Q3KNJ2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Nhej1Q3KNJ2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Nhej1Q3KNJ2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Nhej1Q3KNJ2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Nhej1Q3KNJ2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Nhej1Q3KNJ2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.3■■□□□ 1.64
Nhej1Q3KNJ2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.3■■□□□ 1.64
Nhej1Q3KNJ2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Nhej1Q3KNJ2 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.29■■□□□ 1.64
Nhej1Q3KNJ2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Nhej1Q3KNJ2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Nhej1Q3KNJ2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Nhej1Q3KNJ2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.28■■□□□ 1.64
Nhej1Q3KNJ2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.27■■□□□ 1.64
Nhej1Q3KNJ2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Nhej1Q3KNJ2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Nhej1Q3KNJ2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
Nhej1Q3KNJ2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Nhej1Q3KNJ2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Nhej1Q3KNJ2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Nhej1Q3KNJ2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
Nhej1Q3KNJ2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Nhej1Q3KNJ2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
Nhej1Q3KNJ2 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.22■■□□□ 1.63
Nhej1Q3KNJ2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Nhej1Q3KNJ2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Nhej1Q3KNJ2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Nhej1Q3KNJ2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.21■■□□□ 1.63
Nhej1Q3KNJ2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.2■■□□□ 1.62
Nhej1Q3KNJ2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Nhej1Q3KNJ2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Nhej1Q3KNJ2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Nhej1Q3KNJ2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Nhej1Q3KNJ2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Nhej1Q3KNJ2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Nhej1Q3KNJ2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.18■■□□□ 1.62
Nhej1Q3KNJ2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.18■■□□□ 1.62
Nhej1Q3KNJ2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Nhej1Q3KNJ2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Nhej1Q3KNJ2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.17■■□□□ 1.62
Nhej1Q3KNJ2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Nhej1Q3KNJ2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Nhej1Q3KNJ2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Nhej1Q3KNJ2 Zfp131-205ENSMUST00000223812 663 ntBASIC25.16■■□□□ 1.62
Nhej1Q3KNJ2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
Nhej1Q3KNJ2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Nhej1Q3KNJ2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Nhej1Q3KNJ2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Nhej1Q3KNJ2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Nhej1Q3KNJ2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Nhej1Q3KNJ2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Nhej1Q3KNJ2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
Nhej1Q3KNJ2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Nhej1Q3KNJ2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.14■■□□□ 1.61
Nhej1Q3KNJ2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Nhej1Q3KNJ2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Nhej1Q3KNJ2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Nhej1Q3KNJ2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Nhej1Q3KNJ2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Nhej1Q3KNJ2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Nhej1Q3KNJ2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Nhej1Q3KNJ2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Nhej1Q3KNJ2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Nhej1Q3KNJ2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nhej1Q3KNJ2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.09■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms