Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col10a1Q05306 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col10a1Q05306 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.06■■□□□ 1.12
Col10a1Q05306 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.06■■□□□ 1.12
Col10a1Q05306 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col10a1Q05306 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col10a1Q05306 Nkain2-201ENSMUST00000092602 558 ntBASIC22.05■■□□□ 1.12
Col10a1Q05306 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col10a1Q05306 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.04■■□□□ 1.12
Col10a1Q05306 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col10a1Q05306 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col10a1Q05306 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col10a1Q05306 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col10a1Q05306 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col10a1Q05306 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.03■■□□□ 1.12
Col10a1Q05306 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.02■■□□□ 1.11
Col10a1Q05306 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.01■■□□□ 1.11
Col10a1Q05306 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col10a1Q05306 Gm6821-201ENSMUST00000107540 542 ntBASIC22.01■■□□□ 1.11
Col10a1Q05306 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Col10a1Q05306 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
Col10a1Q05306 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22■■□□□ 1.11
Col10a1Q05306 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Col10a1Q05306 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
Col10a1Q05306 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22■■□□□ 1.11
Col10a1Q05306 Gm30023-201ENSMUST00000197970 889 ntBASIC22■■□□□ 1.11
Col10a1Q05306 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Col10a1Q05306 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col10a1Q05306 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col10a1Q05306 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Col10a1Q05306 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.98■■□□□ 1.11
Col10a1Q05306 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Col10a1Q05306 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col10a1Q05306 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col10a1Q05306 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Col10a1Q05306 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col10a1Q05306 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Col10a1Q05306 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col10a1Q05306 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col10a1Q05306 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col10a1Q05306 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col10a1Q05306 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Col10a1Q05306 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col10a1Q05306 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.93■■□□□ 1.1
Col10a1Q05306 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col10a1Q05306 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col10a1Q05306 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col10a1Q05306 Gm8503-201ENSMUST00000118131 455 ntBASIC21.91■■□□□ 1.1
Col10a1Q05306 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col10a1Q05306 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Col10a1Q05306 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col10a1Q05306 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Col10a1Q05306 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.9■■□□□ 1.1
Col10a1Q05306 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col10a1Q05306 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col10a1Q05306 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col10a1Q05306 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col10a1Q05306 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col10a1Q05306 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.88■■□□□ 1.09
Col10a1Q05306 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col10a1Q05306 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col10a1Q05306 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col10a1Q05306 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col10a1Q05306 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col10a1Q05306 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.87■■□□□ 1.09
Col10a1Q05306 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col10a1Q05306 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.87■■□□□ 1.09
Col10a1Q05306 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col10a1Q05306 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Col10a1Q05306 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col10a1Q05306 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.85■■□□□ 1.09
Col10a1Q05306 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col10a1Q05306 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col10a1Q05306 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Col10a1Q05306 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Col10a1Q05306 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col10a1Q05306 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.83■■□□□ 1.09
Col10a1Q05306 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.83■■□□□ 1.09
Col10a1Q05306 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col10a1Q05306 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.83■■□□□ 1.08
Col10a1Q05306 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col10a1Q05306 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col10a1Q05306 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col10a1Q05306 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col10a1Q05306 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col10a1Q05306 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col10a1Q05306 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col10a1Q05306 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col10a1Q05306 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col10a1Q05306 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col10a1Q05306 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col10a1Q05306 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Col10a1Q05306 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.79■■□□□ 1.08
Col10a1Q05306 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Col10a1Q05306 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col10a1Q05306 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col10a1Q05306 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.77■■□□□ 1.08
Col10a1Q05306 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col10a1Q05306 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col10a1Q05306 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms