Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Gm30023-201ENSMUST00000197970 889 ntBASIC23.8■■□□□ 1.4
SgcgP82348 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SgcgP82348 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.79■■□□□ 1.4
SgcgP82348 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SgcgP82348 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SgcgP82348 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SgcgP82348 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SgcgP82348 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.78■■□□□ 1.4
SgcgP82348 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.77■■□□□ 1.4
SgcgP82348 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.76■■□□□ 1.39
SgcgP82348 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SgcgP82348 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SgcgP82348 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SgcgP82348 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
SgcgP82348 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SgcgP82348 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.72■■□□□ 1.39
SgcgP82348 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SgcgP82348 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SgcgP82348 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SgcgP82348 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.7■■□□□ 1.38
SgcgP82348 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SgcgP82348 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SgcgP82348 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.69■■□□□ 1.38
SgcgP82348 Gm11599-201ENSMUST00000118720 878 ntBASIC23.68■■□□□ 1.38
SgcgP82348 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
SgcgP82348 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.67■■□□□ 1.38
SgcgP82348 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SgcgP82348 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SgcgP82348 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.66■■□□□ 1.38
SgcgP82348 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SgcgP82348 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SgcgP82348 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SgcgP82348 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.65■■□□□ 1.38
SgcgP82348 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.64■■□□□ 1.38
SgcgP82348 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SgcgP82348 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SgcgP82348 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SgcgP82348 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SgcgP82348 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
SgcgP82348 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.62■■□□□ 1.37
SgcgP82348 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SgcgP82348 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SgcgP82348 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SgcgP82348 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SgcgP82348 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SgcgP82348 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SgcgP82348 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
SgcgP82348 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SgcgP82348 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SgcgP82348 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SgcgP82348 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SgcgP82348 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SgcgP82348 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SgcgP82348 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.55■■□□□ 1.36
SgcgP82348 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SgcgP82348 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SgcgP82348 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SgcgP82348 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
SgcgP82348 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SgcgP82348 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SgcgP82348 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.53■■□□□ 1.36
SgcgP82348 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SgcgP82348 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SgcgP82348 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SgcgP82348 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
SgcgP82348 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SgcgP82348 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SgcgP82348 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SgcgP82348 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SgcgP82348 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.5■■□□□ 1.35
SgcgP82348 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SgcgP82348 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SgcgP82348 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SgcgP82348 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SgcgP82348 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SgcgP82348 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SgcgP82348 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SgcgP82348 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SgcgP82348 Particl-201ENSMUST00000205370 1560 ntBASIC23.48■■□□□ 1.35
SgcgP82348 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SgcgP82348 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.47■■□□□ 1.35
SgcgP82348 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
SgcgP82348 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SgcgP82348 Amer2-203ENSMUST00000225247 2662 ntBASIC23.44■■□□□ 1.34
SgcgP82348 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.44■■□□□ 1.34
SgcgP82348 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
SgcgP82348 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
SgcgP82348 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.44■■□□□ 1.34
SgcgP82348 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SgcgP82348 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SgcgP82348 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.42■■□□□ 1.34
SgcgP82348 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.42■■□□□ 1.34
SgcgP82348 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.42■■□□□ 1.34
SgcgP82348 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
SgcgP82348 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.41■■□□□ 1.34
SgcgP82348 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.41■■□□□ 1.34
SgcgP82348 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
SgcgP82348 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
SgcgP82348 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SgcgP82348 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms