Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Crnkl1P63154 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Crnkl1P63154 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.36■■□□□ 1.33
Crnkl1P63154 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
Crnkl1P63154 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Crnkl1P63154 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Crnkl1P63154 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Crnkl1P63154 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.34■■□□□ 1.33
Crnkl1P63154 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Crnkl1P63154 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Crnkl1P63154 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Crnkl1P63154 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Crnkl1P63154 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Crnkl1P63154 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Crnkl1P63154 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Crnkl1P63154 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Crnkl1P63154 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.3■■□□□ 1.32
Crnkl1P63154 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.3■■□□□ 1.32
Crnkl1P63154 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.3■■□□□ 1.32
Crnkl1P63154 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Crnkl1P63154 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.29■■□□□ 1.32
Crnkl1P63154 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Crnkl1P63154 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Crnkl1P63154 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Crnkl1P63154 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Crnkl1P63154 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Crnkl1P63154 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
Crnkl1P63154 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Crnkl1P63154 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Crnkl1P63154 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Crnkl1P63154 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.25■■□□□ 1.31
Crnkl1P63154 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Crnkl1P63154 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Crnkl1P63154 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
Crnkl1P63154 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Crnkl1P63154 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Crnkl1P63154 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.23■■□□□ 1.31
Crnkl1P63154 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
Crnkl1P63154 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
Crnkl1P63154 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.22■■□□□ 1.31
Crnkl1P63154 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Crnkl1P63154 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
Crnkl1P63154 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Crnkl1P63154 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Crnkl1P63154 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Crnkl1P63154 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Crnkl1P63154 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Crnkl1P63154 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Crnkl1P63154 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.21■■□□□ 1.31
Crnkl1P63154 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
Crnkl1P63154 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Crnkl1P63154 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Crnkl1P63154 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Crnkl1P63154 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Crnkl1P63154 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Crnkl1P63154 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Crnkl1P63154 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.19■■□□□ 1.3
Crnkl1P63154 Zfp131-205ENSMUST00000223812 663 ntBASIC23.19■■□□□ 1.3
Crnkl1P63154 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Crnkl1P63154 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Crnkl1P63154 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Crnkl1P63154 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Crnkl1P63154 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Crnkl1P63154 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Crnkl1P63154 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Crnkl1P63154 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Crnkl1P63154 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Crnkl1P63154 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Crnkl1P63154 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Crnkl1P63154 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Crnkl1P63154 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Crnkl1P63154 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Crnkl1P63154 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Crnkl1P63154 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Crnkl1P63154 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Crnkl1P63154 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Crnkl1P63154 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Crnkl1P63154 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Crnkl1P63154 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
Crnkl1P63154 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
Crnkl1P63154 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Crnkl1P63154 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Crnkl1P63154 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Crnkl1P63154 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Crnkl1P63154 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Crnkl1P63154 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Crnkl1P63154 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Crnkl1P63154 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Crnkl1P63154 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Crnkl1P63154 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Crnkl1P63154 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Crnkl1P63154 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Crnkl1P63154 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.09■■□□□ 1.29
Crnkl1P63154 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Crnkl1P63154 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.08■■□□□ 1.29
Crnkl1P63154 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Crnkl1P63154 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Crnkl1P63154 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Crnkl1P63154 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Crnkl1P63154 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms