Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ybx1P62960 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Ybx1P62960 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ybx1P62960 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ybx1P62960 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Ybx1P62960 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Ybx1P62960 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ybx1P62960 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ybx1P62960 Mir6538-201ENSMUST00000183713 110 ntBASIC24.86■■□□□ 1.57
Ybx1P62960 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ybx1P62960 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ybx1P62960 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ybx1P62960 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ybx1P62960 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ybx1P62960 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ybx1P62960 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ybx1P62960 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ybx1P62960 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ybx1P62960 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Ybx1P62960 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.83■■□□□ 1.56
Ybx1P62960 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ybx1P62960 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ybx1P62960 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.81■■□□□ 1.56
Ybx1P62960 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.8■■□□□ 1.56
Ybx1P62960 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Ybx1P62960 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ybx1P62960 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.78■■□□□ 1.56
Ybx1P62960 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ybx1P62960 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ybx1P62960 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ybx1P62960 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Ybx1P62960 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Ybx1P62960 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.76■■□□□ 1.55
Ybx1P62960 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ybx1P62960 Gm6311-201ENSMUST00000073790 878 ntBASIC24.76■■□□□ 1.55
Ybx1P62960 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ybx1P62960 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Ybx1P62960 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.75■■□□□ 1.55
Ybx1P62960 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ybx1P62960 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
Ybx1P62960 Cap2-205ENSMUST00000225824 1634 ntBASIC24.74■■□□□ 1.55
Ybx1P62960 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ybx1P62960 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.73■■□□□ 1.55
Ybx1P62960 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.72■■□□□ 1.55
Ybx1P62960 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ybx1P62960 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ybx1P62960 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.72■■□□□ 1.55
Ybx1P62960 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ybx1P62960 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ybx1P62960 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.7■■□□□ 1.54
Ybx1P62960 Particl-201ENSMUST00000205370 1560 ntBASIC24.7■■□□□ 1.54
Ybx1P62960 Zxda-201ENSMUST00000117281 2621 ntBASIC24.69■■□□□ 1.54
Ybx1P62960 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ybx1P62960 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.69■■□□□ 1.54
Ybx1P62960 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.68■■□□□ 1.54
Ybx1P62960 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Ybx1P62960 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ybx1P62960 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ybx1P62960 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ybx1P62960 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ybx1P62960 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ybx1P62960 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ybx1P62960 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ybx1P62960 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ybx1P62960 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ybx1P62960 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ybx1P62960 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
Ybx1P62960 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Ybx1P62960 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ybx1P62960 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ybx1P62960 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ybx1P62960 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ybx1P62960 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Ybx1P62960 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ybx1P62960 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ybx1P62960 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ybx1P62960 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.62■■□□□ 1.53
Ybx1P62960 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ybx1P62960 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ybx1P62960 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ybx1P62960 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ybx1P62960 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.6■■□□□ 1.53
Ybx1P62960 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.6■■□□□ 1.53
Ybx1P62960 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Ybx1P62960 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ybx1P62960 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
Ybx1P62960 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Ybx1P62960 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Ybx1P62960 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ybx1P62960 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ybx1P62960 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ybx1P62960 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ybx1P62960 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.53■■□□□ 1.52
Ybx1P62960 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ybx1P62960 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ybx1P62960 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Ybx1P62960 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ybx1P62960 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ybx1P62960 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Ybx1P62960 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms