Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm5P62322 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lsm5P62322 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.77■□□□□ 0.76
Lsm5P62322 Gm27322-201ENSMUST00000184007 104 ntBASIC19.77■□□□□ 0.76
Lsm5P62322 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm5P62322 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm5P62322 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm5P62322 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Lsm5P62322 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm5P62322 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Lsm5P62322 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lsm5P62322 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm5P62322 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.75■□□□□ 0.75
Lsm5P62322 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm5P62322 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Lsm5P62322 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm5P62322 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm5P62322 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm5P62322 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm5P62322 Gm25262-201ENSMUST00000174934 133 ntBASIC19.74■□□□□ 0.75
Lsm5P62322 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm5P62322 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Lsm5P62322 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm5P62322 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm5P62322 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm5P62322 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm5P62322 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.72■□□□□ 0.75
Lsm5P62322 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Lsm5P62322 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
Lsm5P62322 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm5P62322 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Lsm5P62322 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm5P62322 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Lsm5P62322 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm5P62322 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Lsm5P62322 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm5P62322 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm5P62322 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm5P62322 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm5P62322 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm5P62322 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm5P62322 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm5P62322 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm5P62322 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Lsm5P62322 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.68■□□□□ 0.74
Lsm5P62322 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Lsm5P62322 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.68■□□□□ 0.74
Lsm5P62322 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm5P62322 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm5P62322 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.67■□□□□ 0.74
Lsm5P62322 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm5P62322 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm5P62322 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm5P62322 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm5P62322 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm5P62322 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm5P62322 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm5P62322 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm5P62322 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lsm5P62322 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lsm5P62322 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm5P62322 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm5P62322 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm5P62322 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm5P62322 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.62■□□□□ 0.73
Lsm5P62322 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm5P62322 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm5P62322 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Lsm5P62322 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm5P62322 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm5P62322 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.6■□□□□ 0.73
Lsm5P62322 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm5P62322 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.6■□□□□ 0.73
Lsm5P62322 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm5P62322 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm5P62322 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm5P62322 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm5P62322 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm5P62322 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Lsm5P62322 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Lsm5P62322 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm5P62322 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm5P62322 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.57■□□□□ 0.72
Lsm5P62322 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.57■□□□□ 0.72
Lsm5P62322 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm5P62322 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm5P62322 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm5P62322 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm5P62322 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm5P62322 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm5P62322 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm5P62322 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lsm5P62322 Peli2-204ENSMUST00000226513 1320 ntBASIC19.55■□□□□ 0.72
Lsm5P62322 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm5P62322 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm5P62322 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm5P62322 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm5P62322 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Lsm5P62322 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm5P62322 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms