Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Mmp20P57748 Particl-201ENSMUST00000205370 1560 ntBASIC28.16■■■□□ 2.1
Mmp20P57748 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Mmp20P57748 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.14■■■□□ 2.1
Mmp20P57748 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Mmp20P57748 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Mmp20P57748 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Mmp20P57748 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.12■■■□□ 2.09
Mmp20P57748 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Mmp20P57748 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Mmp20P57748 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.11■■■□□ 2.09
Mmp20P57748 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Mmp20P57748 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Mmp20P57748 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.09■■■□□ 2.09
Mmp20P57748 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
Mmp20P57748 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Mmp20P57748 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Mmp20P57748 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.08■■■□□ 2.09
Mmp20P57748 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Mmp20P57748 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Mmp20P57748 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Mmp20P57748 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Mmp20P57748 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
Mmp20P57748 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Mmp20P57748 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.04■■■□□ 2.08
Mmp20P57748 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Mmp20P57748 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.04■■■□□ 2.08
Mmp20P57748 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Mmp20P57748 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
Mmp20P57748 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.03■■■□□ 2.08
Mmp20P57748 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Mmp20P57748 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Mmp20P57748 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28■■■□□ 2.07
Mmp20P57748 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Mmp20P57748 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Mmp20P57748 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Mmp20P57748 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Mmp20P57748 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Mmp20P57748 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Mmp20P57748 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Mmp20P57748 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.94■■■□□ 2.06
Mmp20P57748 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Mmp20P57748 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
Mmp20P57748 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Mmp20P57748 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.92■■■□□ 2.06
Mmp20P57748 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Mmp20P57748 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Mmp20P57748 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Mmp20P57748 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Mmp20P57748 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.9■■■□□ 2.06
Mmp20P57748 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
Mmp20P57748 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Mmp20P57748 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Mmp20P57748 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Mmp20P57748 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Mmp20P57748 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Mmp20P57748 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Mmp20P57748 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
Mmp20P57748 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.86■■■□□ 2.05
Mmp20P57748 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Mmp20P57748 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Mmp20P57748 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.86■■■□□ 2.05
Mmp20P57748 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Mmp20P57748 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Mmp20P57748 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Mmp20P57748 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.84■■■□□ 2.05
Mmp20P57748 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
Mmp20P57748 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Mmp20P57748 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.83■■■□□ 2.05
Mmp20P57748 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Mmp20P57748 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Mmp20P57748 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Mmp20P57748 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Mmp20P57748 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.82■■■□□ 2.04
Mmp20P57748 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.82■■■□□ 2.04
Mmp20P57748 Scarna2-201ENSMUST00000157560 414 ntBASIC27.82■■■□□ 2.04
Mmp20P57748 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Mmp20P57748 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Mmp20P57748 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Mmp20P57748 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Mmp20P57748 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Mmp20P57748 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Mmp20P57748 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Mmp20P57748 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Mmp20P57748 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Mmp20P57748 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Mmp20P57748 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
Mmp20P57748 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Mmp20P57748 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Mmp20P57748 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Mmp20P57748 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.75■■■□□ 2.03
Mmp20P57748 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Mmp20P57748 Gm9806-201ENSMUST00000051080 552 ntBASIC27.74■■■□□ 2.03
Mmp20P57748 Gm11687-201ENSMUST00000118911 886 ntBASIC27.73■■■□□ 2.03
Mmp20P57748 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Mmp20P57748 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Mmp20P57748 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Mmp20P57748 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Mmp20P57748 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Mmp20P57748 Gm4799-201ENSMUST00000095396 657 ntBASIC27.72■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms