Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab4aP56371 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rab4aP56371 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab4aP56371 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab4aP56371 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab4aP56371 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab4aP56371 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rab4aP56371 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.71■□□□□ 0.59
Rab4aP56371 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.71■□□□□ 0.58
Rab4aP56371 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab4aP56371 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab4aP56371 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab4aP56371 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.7■□□□□ 0.58
Rab4aP56371 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab4aP56371 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rab4aP56371 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab4aP56371 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab4aP56371 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab4aP56371 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab4aP56371 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab4aP56371 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab4aP56371 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Rab4aP56371 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rab4aP56371 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab4aP56371 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab4aP56371 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.66■□□□□ 0.58
Rab4aP56371 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab4aP56371 Mipep-204ENSMUST00000225043 1548 ntBASIC18.66■□□□□ 0.58
Rab4aP56371 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab4aP56371 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rab4aP56371 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab4aP56371 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab4aP56371 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab4aP56371 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab4aP56371 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab4aP56371 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rab4aP56371 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rab4aP56371 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rab4aP56371 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rab4aP56371 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rab4aP56371 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Rab4aP56371 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rab4aP56371 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab4aP56371 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rab4aP56371 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab4aP56371 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rab4aP56371 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab4aP56371 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.63■□□□□ 0.57
Rab4aP56371 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Rab4aP56371 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab4aP56371 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rab4aP56371 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab4aP56371 Notumos-201ENSMUST00000151998 2659 ntBASIC18.63■□□□□ 0.57
Rab4aP56371 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab4aP56371 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rab4aP56371 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.62■□□□□ 0.57
Rab4aP56371 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rab4aP56371 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Rab4aP56371 Rab21-202ENSMUST00000218831 843 ntBASIC18.61■□□□□ 0.57
Rab4aP56371 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab4aP56371 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rab4aP56371 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rab4aP56371 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.59■□□□□ 0.57
Rab4aP56371 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab4aP56371 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab4aP56371 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rab4aP56371 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rab4aP56371 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab4aP56371 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab4aP56371 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab4aP56371 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab4aP56371 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rab4aP56371 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.57■□□□□ 0.56
Rab4aP56371 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab4aP56371 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rab4aP56371 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab4aP56371 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab4aP56371 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab4aP56371 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab4aP56371 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
Rab4aP56371 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab4aP56371 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab4aP56371 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab4aP56371 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rab4aP56371 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.54■□□□□ 0.56
Rab4aP56371 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab4aP56371 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab4aP56371 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab4aP56371 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rab4aP56371 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab4aP56371 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab4aP56371 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab4aP56371 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab4aP56371 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rab4aP56371 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab4aP56371 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Rab4aP56371 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.52■□□□□ 0.56
Rab4aP56371 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab4aP56371 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab4aP56371 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms