Protein–RNA interactions for Protein: P43021

Nodal, Nodal, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NodalP43021 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NodalP43021 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NodalP43021 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NodalP43021 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NodalP43021 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NodalP43021 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NodalP43021 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
NodalP43021 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.96■□□□□ 0.95
NodalP43021 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NodalP43021 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NodalP43021 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NodalP43021 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.94■□□□□ 0.94
NodalP43021 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
NodalP43021 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NodalP43021 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NodalP43021 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.93■□□□□ 0.94
NodalP43021 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NodalP43021 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NodalP43021 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.93■□□□□ 0.94
NodalP43021 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NodalP43021 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.92■□□□□ 0.94
NodalP43021 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.91■□□□□ 0.94
NodalP43021 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.91■□□□□ 0.94
NodalP43021 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.91■□□□□ 0.94
NodalP43021 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
NodalP43021 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NodalP43021 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NodalP43021 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NodalP43021 Gm9397-201ENSMUST00000200125 605 ntBASIC20.9■□□□□ 0.94
NodalP43021 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NodalP43021 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NodalP43021 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NodalP43021 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NodalP43021 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NodalP43021 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NodalP43021 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
NodalP43021 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NodalP43021 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NodalP43021 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NodalP43021 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NodalP43021 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NodalP43021 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NodalP43021 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
NodalP43021 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NodalP43021 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NodalP43021 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NodalP43021 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.86■□□□□ 0.93
NodalP43021 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.85■□□□□ 0.93
NodalP43021 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NodalP43021 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NodalP43021 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NodalP43021 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NodalP43021 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
NodalP43021 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.83■□□□□ 0.93
NodalP43021 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NodalP43021 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NodalP43021 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NodalP43021 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NodalP43021 Gm24970-201ENSMUST00000175582 82 ntBASIC20.82■□□□□ 0.92
NodalP43021 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.82■□□□□ 0.92
NodalP43021 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NodalP43021 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NodalP43021 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.82■□□□□ 0.92
NodalP43021 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NodalP43021 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NodalP43021 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.8■□□□□ 0.92
NodalP43021 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NodalP43021 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.8■□□□□ 0.92
NodalP43021 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NodalP43021 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NodalP43021 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NodalP43021 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NodalP43021 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NodalP43021 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NodalP43021 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NodalP43021 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NodalP43021 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NodalP43021 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NodalP43021 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NodalP43021 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.76■□□□□ 0.91
NodalP43021 Gm45855-201ENSMUST00000212546 880 ntBASIC20.76■□□□□ 0.91
NodalP43021 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
NodalP43021 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.76■□□□□ 0.91
NodalP43021 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NodalP43021 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NodalP43021 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NodalP43021 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NodalP43021 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NodalP43021 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
NodalP43021 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NodalP43021 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NodalP43021 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NodalP43021 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NodalP43021 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NodalP43021 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NodalP43021 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NodalP43021 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NodalP43021 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NodalP43021 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NodalP43021 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms