Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.91■□□□□ 0.78
Cdkn1aP39689 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdkn1aP39689 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdkn1aP39689 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdkn1aP39689 Gm30023-201ENSMUST00000197970 889 ntBASIC19.9■□□□□ 0.78
Cdkn1aP39689 Gm7432-201ENSMUST00000210343 879 ntBASIC19.9■□□□□ 0.78
Cdkn1aP39689 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdkn1aP39689 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdkn1aP39689 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.88■□□□□ 0.77
Cdkn1aP39689 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Cdkn1aP39689 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdkn1aP39689 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.87■□□□□ 0.77
Cdkn1aP39689 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cdkn1aP39689 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdkn1aP39689 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cdkn1aP39689 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdkn1aP39689 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.86■□□□□ 0.77
Cdkn1aP39689 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.85■□□□□ 0.77
Cdkn1aP39689 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdkn1aP39689 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.84■□□□□ 0.77
Cdkn1aP39689 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdkn1aP39689 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdkn1aP39689 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdkn1aP39689 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkn1aP39689 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn1aP39689 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.81■□□□□ 0.76
Cdkn1aP39689 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.8■□□□□ 0.76
Cdkn1aP39689 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn1aP39689 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn1aP39689 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn1aP39689 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn1aP39689 Gm11599-201ENSMUST00000118720 878 ntBASIC19.78■□□□□ 0.76
Cdkn1aP39689 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
Cdkn1aP39689 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.78■□□□□ 0.76
Cdkn1aP39689 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn1aP39689 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cdkn1aP39689 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Cdkn1aP39689 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdkn1aP39689 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdkn1aP39689 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdkn1aP39689 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.76■□□□□ 0.75
Cdkn1aP39689 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkn1aP39689 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkn1aP39689 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkn1aP39689 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.75■□□□□ 0.75
Cdkn1aP39689 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkn1aP39689 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkn1aP39689 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn1aP39689 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn1aP39689 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn1aP39689 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn1aP39689 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn1aP39689 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdkn1aP39689 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cdkn1aP39689 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn1aP39689 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn1aP39689 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn1aP39689 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn1aP39689 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Cdkn1aP39689 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkn1aP39689 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkn1aP39689 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkn1aP39689 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Cdkn1aP39689 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.7■□□□□ 0.74
Cdkn1aP39689 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkn1aP39689 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkn1aP39689 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkn1aP39689 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn1aP39689 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdkn1aP39689 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.69■□□□□ 0.74
Cdkn1aP39689 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cdkn1aP39689 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkn1aP39689 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkn1aP39689 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkn1aP39689 Particl-201ENSMUST00000205370 1560 ntBASIC19.67■□□□□ 0.74
Cdkn1aP39689 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkn1aP39689 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkn1aP39689 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkn1aP39689 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.65■□□□□ 0.74
Cdkn1aP39689 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkn1aP39689 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkn1aP39689 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkn1aP39689 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdkn1aP39689 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn1aP39689 Amer2-203ENSMUST00000225247 2662 ntBASIC19.61■□□□□ 0.73
Cdkn1aP39689 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdkn1aP39689 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkn1aP39689 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkn1aP39689 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.6■□□□□ 0.73
Cdkn1aP39689 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn1aP39689 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Cdkn1aP39689 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn1aP39689 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn1aP39689 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Cdkn1aP39689 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.58■□□□□ 0.73
Cdkn1aP39689 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cdkn1aP39689 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.58■□□□□ 0.73
Cdkn1aP39689 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.58■□□□□ 0.72
Cdkn1aP39689 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkn1aP39689 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms