Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.75■■□□□ 1.39
HmgclP38060 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HmgclP38060 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HmgclP38060 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HmgclP38060 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.74■■□□□ 1.39
HmgclP38060 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
HmgclP38060 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HmgclP38060 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
HmgclP38060 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HmgclP38060 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HmgclP38060 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
HmgclP38060 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HmgclP38060 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.7■■□□□ 1.38
HmgclP38060 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HmgclP38060 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HmgclP38060 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HmgclP38060 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HmgclP38060 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.68■■□□□ 1.38
HmgclP38060 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HmgclP38060 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
HmgclP38060 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HmgclP38060 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
HmgclP38060 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.66■■□□□ 1.38
HmgclP38060 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
HmgclP38060 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.66■■□□□ 1.38
HmgclP38060 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HmgclP38060 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HmgclP38060 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
HmgclP38060 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
HmgclP38060 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
HmgclP38060 Gm30023-201ENSMUST00000197970 889 ntBASIC23.65■■□□□ 1.38
HmgclP38060 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HmgclP38060 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HmgclP38060 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HmgclP38060 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HmgclP38060 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
HmgclP38060 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HmgclP38060 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.61■■□□□ 1.37
HmgclP38060 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
HmgclP38060 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.61■■□□□ 1.37
HmgclP38060 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HmgclP38060 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HmgclP38060 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
HmgclP38060 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HmgclP38060 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
HmgclP38060 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HmgclP38060 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HmgclP38060 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HmgclP38060 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.58■■□□□ 1.37
HmgclP38060 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
HmgclP38060 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
HmgclP38060 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HmgclP38060 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HmgclP38060 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
HmgclP38060 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.56■■□□□ 1.36
HmgclP38060 Nkain2-201ENSMUST00000092602 558 ntBASIC23.56■■□□□ 1.36
HmgclP38060 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
HmgclP38060 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
HmgclP38060 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
HmgclP38060 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HmgclP38060 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HmgclP38060 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HmgclP38060 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HmgclP38060 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
HmgclP38060 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.53■■□□□ 1.36
HmgclP38060 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HmgclP38060 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
HmgclP38060 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
HmgclP38060 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
HmgclP38060 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HmgclP38060 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
HmgclP38060 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
HmgclP38060 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.5■■□□□ 1.35
HmgclP38060 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
HmgclP38060 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.49■■□□□ 1.35
HmgclP38060 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.49■■□□□ 1.35
HmgclP38060 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HmgclP38060 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HmgclP38060 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.47■■□□□ 1.35
HmgclP38060 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HmgclP38060 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HmgclP38060 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
HmgclP38060 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
HmgclP38060 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
HmgclP38060 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HmgclP38060 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.44■■□□□ 1.34
HmgclP38060 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.44■■□□□ 1.34
HmgclP38060 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HmgclP38060 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HmgclP38060 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
HmgclP38060 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HmgclP38060 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
HmgclP38060 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HmgclP38060 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
HmgclP38060 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
HmgclP38060 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
HmgclP38060 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HmgclP38060 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HmgclP38060 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
HmgclP38060 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms