Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab3dP35276 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rab3dP35276 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab3dP35276 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab3dP35276 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rab3dP35276 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab3dP35276 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rab3dP35276 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rab3dP35276 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rab3dP35276 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab3dP35276 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.83■□□□□ 0.76
Rab3dP35276 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab3dP35276 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rab3dP35276 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab3dP35276 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab3dP35276 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab3dP35276 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rab3dP35276 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab3dP35276 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab3dP35276 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab3dP35276 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rab3dP35276 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rab3dP35276 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab3dP35276 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.79■□□□□ 0.76
Rab3dP35276 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab3dP35276 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab3dP35276 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab3dP35276 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab3dP35276 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rab3dP35276 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3dP35276 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3dP35276 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3dP35276 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3dP35276 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3dP35276 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab3dP35276 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab3dP35276 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rab3dP35276 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab3dP35276 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab3dP35276 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3dP35276 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3dP35276 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3dP35276 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3dP35276 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3dP35276 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3dP35276 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3dP35276 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.73■□□□□ 0.75
Rab3dP35276 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.72■□□□□ 0.75
Rab3dP35276 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rab3dP35276 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab3dP35276 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rab3dP35276 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rab3dP35276 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab3dP35276 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rab3dP35276 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab3dP35276 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab3dP35276 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab3dP35276 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab3dP35276 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab3dP35276 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab3dP35276 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rab3dP35276 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab3dP35276 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab3dP35276 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rab3dP35276 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab3dP35276 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab3dP35276 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab3dP35276 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab3dP35276 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab3dP35276 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rab3dP35276 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.66■□□□□ 0.74
Rab3dP35276 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab3dP35276 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rab3dP35276 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab3dP35276 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab3dP35276 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rab3dP35276 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.64■□□□□ 0.73
Rab3dP35276 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab3dP35276 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab3dP35276 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rab3dP35276 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rab3dP35276 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab3dP35276 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab3dP35276 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab3dP35276 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.62■□□□□ 0.73
Rab3dP35276 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab3dP35276 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab3dP35276 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab3dP35276 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab3dP35276 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab3dP35276 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab3dP35276 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.61■□□□□ 0.73
Rab3dP35276 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab3dP35276 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab3dP35276 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab3dP35276 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab3dP35276 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rab3dP35276 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab3dP35276 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab3dP35276 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms