Protein–RNA interactions for Protein: P18480

SNF5, SWI/SNF chromatin-remodeling complex subunit SNF5, yeastyeast

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF5P18480 TPO4YOR273C 1980 nt8.19□□□□□ -1.1
SNF5P18480 EDC2YER035W 438 nt8.18□□□□□ -1.1
SNF5P18480 SRP102YKL154W 735 nt8.18□□□□□ -1.1
SNF5P18480 ASP3-1YLR155C 1089 nt8.18□□□□□ -1.1
SNF5P18480 ASP3-2YLR157C 1089 nt8.18□□□□□ -1.1
SNF5P18480 ASP3-3YLR158C 1089 nt8.18□□□□□ -1.1
SNF5P18480 ASP3-4YLR160C 1089 nt8.18□□□□□ -1.1
SNF5P18480 YNL165WYNL165W 1221 nt8.18□□□□□ -1.1
SNF5P18480 NPP1YCR026C 2229 nt8.17□□□□□ -1.1
SNF5P18480 PCP1YGR101W 1041 nt8.17□□□□□ -1.1
SNF5P18480 YGR210CYGR210C 1236 nt8.16□□□□□ -1.1
SNF5P18480 SKG1YKR100C 1068 nt8.16□□□□□ -1.1
SNF5P18480 DIG1YPL049C 1359 nt8.15□□□□□ -1.1
SNF5P18480 TOS1YBR162C 1368 nt8.15□□□□□ -1.1
SNF5P18480 PUS7YOR243C 2031 nt8.13□□□□□ -1.11
SNF5P18480 YDR306CYDR306C 1437 nt8.13□□□□□ -1.11
SNF5P18480 YJL107CYJL107C 1164 nt8.13□□□□□ -1.11
SNF5P18480 RMA1YKL132C 1293 nt8.13□□□□□ -1.11
SNF5P18480 AMF1YOR378W 1548 nt8.13□□□□□ -1.11
SNF5P18480 GID7YCL039W 2238 nt8.13□□□□□ -1.11
SNF5P18480 MRP1YDR347W 966 nt8.12□□□□□ -1.11
SNF5P18480 TPC1YGR096W 945 nt8.12□□□□□ -1.11
SNF5P18480 SDS24YBR214W 1584 nt8.12□□□□□ -1.11
SNF5P18480 HOG1YLR113W 1308 nt8.11□□□□□ -1.11
SNF5P18480 LSB6YJL100W 1824 nt8.11□□□□□ -1.11
SNF5P18480 EMC3YKL207W 762 nt8.11□□□□□ -1.11
SNF5P18480 AST1YBL069W 1290 nt8.11□□□□□ -1.11
SNF5P18480 ERO1YML130C 1692 nt8.11□□□□□ -1.11
SNF5P18480 RSM23YGL129C 1353 nt8.1□□□□□ -1.11
SNF5P18480 TGA1tA(UGC)A 73 nt8.1□□□□□ -1.11
SNF5P18480 tA(UGC)EtA(UGC)E 73 nt8.1□□□□□ -1.11
SNF5P18480 tA(UGC)GtA(UGC)G 73 nt8.1□□□□□ -1.11
SNF5P18480 tA(UGC)LtA(UGC)L 73 nt8.1□□□□□ -1.11
SNF5P18480 tA(UGC)OtA(UGC)O 73 nt8.1□□□□□ -1.11
SNF5P18480 YKR012CYKR012C 378 nt8.1□□□□□ -1.11
SNF5P18480 LEU2YCL018W 1095 nt8.1□□□□□ -1.11
SNF5P18480 VPS62YGR141W 1404 nt8.1□□□□□ -1.11
SNF5P18480 ENO2YHR174W 1314 nt8.09□□□□□ -1.11
SNF5P18480 YJL160CYJL160C 864 nt8.09□□□□□ -1.11
SNF5P18480 YMR206WYMR206W 942 nt8.09□□□□□ -1.11
SNF5P18480 SAC7YDR389W 1965 nt8.09□□□□□ -1.11
SNF5P18480 MCM5YLR274W 2328 nt8.08□□□□□ -1.12
SNF5P18480 CWC15YDR163W 528 nt8.08□□□□□ -1.12
SNF5P18480 YJL211CYJL211C 444 nt8.08□□□□□ -1.12
SNF5P18480 YPL108WYPL108W 507 nt8.08□□□□□ -1.12
SNF5P18480 YMR209CYMR209C 1374 nt8.08□□□□□ -1.12
SNF5P18480 EEB1YPL095C 1371 nt8.08□□□□□ -1.12
SNF5P18480 ILV3YJR016C 1758 nt8.07□□□□□ -1.12
SNF5P18480 ENO1YGR254W 1314 nt8.07□□□□□ -1.12
SNF5P18480 YHL008CYHL008C 1884 nt8.07□□□□□ -1.12
SNF5P18480 YLR280CYLR280C 351 nt8.07□□□□□ -1.12
SNF5P18480 PET20YPL159C 762 nt8.07□□□□□ -1.12
SNF5P18480 HOS2YGL194C 1359 nt8.07□□□□□ -1.12
SNF5P18480 COX16YJL003W 357 nt8.06□□□□□ -1.12
SNF5P18480 FCY1YPR062W 477 nt8.06□□□□□ -1.12
SNF5P18480 VBA3YCL069W 1377 nt8.06□□□□□ -1.12
SNF5P18480 YDL086WYDL086W 822 nt8.05□□□□□ -1.12
SNF5P18480 YNR068CYNR068C 819 nt8.03□□□□□ -1.12
SNF5P18480 APM1YPL259C 1428 nt8.03□□□□□ -1.12
SNF5P18480 NAM8YHR086W 1572 nt8.02□□□□□ -1.13
SNF5P18480 YMR210WYMR210W 1350 nt8.02□□□□□ -1.13
SNF5P18480 HIS2YFR025C 1008 nt8.02□□□□□ -1.13
SNF5P18480 ATG22YCL038C 1587 nt8.01□□□□□ -1.13
SNF5P18480 GDH1YOR375C 1365 nt8.01□□□□□ -1.13
SNF5P18480 snR78snR78 87 nt8.01□□□□□ -1.13
SNF5P18480 UGP1YKL035W 1500 nt8□□□□□ -1.13
SNF5P18480 tL(UAA)B1tL(UAA)B1 84 nt8□□□□□ -1.13
SNF5P18480 tL(UAA)B2tL(UAA)B2 84 nt8□□□□□ -1.13
SNF5P18480 tL(UAA)DtL(UAA)D 84 nt8□□□□□ -1.13
SNF5P18480 SUP51tL(UAA)J 84 nt8□□□□□ -1.13
SNF5P18480 tL(UAA)KtL(UAA)K 84 nt8□□□□□ -1.13
SNF5P18480 tL(UAA)LtL(UAA)L 84 nt8□□□□□ -1.13
SNF5P18480 tL(UAA)NtL(UAA)N 84 nt8□□□□□ -1.13
SNF5P18480 Q0144Q0144 330 nt8□□□□□ -1.13
SNF5P18480 ENT4YLL038C 744 nt8□□□□□ -1.13
SNF5P18480 YMR147WYMR147W 672 nt8□□□□□ -1.13
SNF5P18480 YNR064CYNR064C 873 nt8□□□□□ -1.13
SNF5P18480 AIM1YAL046C 357 nt7.99□□□□□ -1.13
SNF5P18480 SCO2YBR024W 906 nt7.99□□□□□ -1.13
SNF5P18480 RIM2YBR192W 1134 nt7.99□□□□□ -1.13
SNF5P18480 SWT21YNL187W 1074 nt7.98□□□□□ -1.13
SNF5P18480 YBL081WYBL081W 1107 nt7.98□□□□□ -1.13
SNF5P18480 URA8YJR103W 1737 nt7.98□□□□□ -1.13
SNF5P18480 YDR509WYDR509W 348 nt7.97□□□□□ -1.13
SNF5P18480 REX2YLR059C 810 nt7.97□□□□□ -1.13
SNF5P18480 IDP3YNL009W 1263 nt7.97□□□□□ -1.13
SNF5P18480 COQ8YGL119W 1506 nt7.97□□□□□ -1.13
SNF5P18480 PIC2YER053C 903 nt7.96□□□□□ -1.14
SNF5P18480 KAE1YKR038C 1161 nt7.96□□□□□ -1.14
SNF5P18480 ADA2YDR448W 1305 nt7.96□□□□□ -1.14
SNF5P18480 YFR020WYFR020W 699 nt7.95□□□□□ -1.14
SNF5P18480 YOR325WYOR325W 474 nt7.95□□□□□ -1.14
SNF5P18480 PSD1YNL169C 1503 nt7.94□□□□□ -1.14
SNF5P18480 SFL1YOR140W 2301 nt7.94□□□□□ -1.14
SNF5P18480 KEL3YPL263C 1956 nt7.93□□□□□ -1.14
SNF5P18480 BAP3YDR046C 1815 nt7.92□□□□□ -1.14
SNF5P18480 YGL118CYGL118C 438 nt7.92□□□□□ -1.14
SNF5P18480 TAD2YJL035C 753 nt7.92□□□□□ -1.14
SNF5P18480 PZF1YPR186C 1290 nt7.92□□□□□ -1.14
SNF5P18480 YPL247CYPL247C 1572 nt7.92□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 36.7 ms