Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.87■□□□□ 0.93
PtcraP0C6B2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PtcraP0C6B2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PtcraP0C6B2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PtcraP0C6B2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.86■□□□□ 0.93
PtcraP0C6B2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.86■□□□□ 0.93
PtcraP0C6B2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PtcraP0C6B2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PtcraP0C6B2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PtcraP0C6B2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PtcraP0C6B2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PtcraP0C6B2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.85■□□□□ 0.93
PtcraP0C6B2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PtcraP0C6B2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PtcraP0C6B2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PtcraP0C6B2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.84■□□□□ 0.93
PtcraP0C6B2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PtcraP0C6B2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PtcraP0C6B2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PtcraP0C6B2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PtcraP0C6B2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PtcraP0C6B2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PtcraP0C6B2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PtcraP0C6B2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PtcraP0C6B2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PtcraP0C6B2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PtcraP0C6B2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PtcraP0C6B2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PtcraP0C6B2 Gm30023-201ENSMUST00000197970 889 ntBASIC20.78■□□□□ 0.92
PtcraP0C6B2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.77■□□□□ 0.92
PtcraP0C6B2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PtcraP0C6B2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.76■□□□□ 0.91
PtcraP0C6B2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PtcraP0C6B2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PtcraP0C6B2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
PtcraP0C6B2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.76■□□□□ 0.91
PtcraP0C6B2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PtcraP0C6B2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PtcraP0C6B2 Nkain2-201ENSMUST00000092602 558 ntBASIC20.75■□□□□ 0.91
PtcraP0C6B2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PtcraP0C6B2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PtcraP0C6B2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PtcraP0C6B2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PtcraP0C6B2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PtcraP0C6B2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PtcraP0C6B2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PtcraP0C6B2 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.72■□□□□ 0.91
PtcraP0C6B2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PtcraP0C6B2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PtcraP0C6B2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PtcraP0C6B2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
PtcraP0C6B2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
PtcraP0C6B2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PtcraP0C6B2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PtcraP0C6B2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PtcraP0C6B2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PtcraP0C6B2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PtcraP0C6B2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PtcraP0C6B2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PtcraP0C6B2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PtcraP0C6B2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PtcraP0C6B2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtcraP0C6B2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.66■□□□□ 0.9
PtcraP0C6B2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PtcraP0C6B2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PtcraP0C6B2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtcraP0C6B2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PtcraP0C6B2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtcraP0C6B2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.65■□□□□ 0.9
PtcraP0C6B2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.65■□□□□ 0.9
PtcraP0C6B2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtcraP0C6B2 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.65■□□□□ 0.9
PtcraP0C6B2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PtcraP0C6B2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PtcraP0C6B2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PtcraP0C6B2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PtcraP0C6B2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PtcraP0C6B2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.62■□□□□ 0.89
PtcraP0C6B2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PtcraP0C6B2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PtcraP0C6B2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PtcraP0C6B2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PtcraP0C6B2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PtcraP0C6B2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.6■□□□□ 0.89
PtcraP0C6B2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PtcraP0C6B2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PtcraP0C6B2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PtcraP0C6B2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PtcraP0C6B2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PtcraP0C6B2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PtcraP0C6B2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PtcraP0C6B2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PtcraP0C6B2 Gm6821-201ENSMUST00000107540 542 ntBASIC20.57■□□□□ 0.88
PtcraP0C6B2 Gm8503-201ENSMUST00000118131 455 ntBASIC20.57■□□□□ 0.88
PtcraP0C6B2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PtcraP0C6B2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PtcraP0C6B2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.57■□□□□ 0.88
PtcraP0C6B2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PtcraP0C6B2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PtcraP0C6B2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms