Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
P01852 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
P01852 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
P01852 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
P01852 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
P01852 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
P01852 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
P01852 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.83■■□□□ 1.09
P01852 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
P01852 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
P01852 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
P01852 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.82■■□□□ 1.08
P01852 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
P01852 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
P01852 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.82■■□□□ 1.08
P01852 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P01852 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P01852 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
P01852 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.8■■□□□ 1.08
P01852 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
P01852 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.79■■□□□ 1.08
P01852 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
P01852 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.78■■□□□ 1.08
P01852 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
P01852 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
P01852 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
P01852 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
P01852 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
P01852 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
P01852 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
P01852 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
P01852 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
P01852 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
P01852 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
P01852 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.73■■□□□ 1.07
P01852 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
P01852 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
P01852 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.73■■□□□ 1.07
P01852 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
P01852 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.72■■□□□ 1.07
P01852 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
P01852 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
P01852 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
P01852 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.71■■□□□ 1.07
P01852 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
P01852 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
P01852 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.7■■□□□ 1.06
P01852 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
P01852 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
P01852 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
P01852 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.68■■□□□ 1.06
P01852 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
P01852 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
P01852 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
P01852 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
P01852 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
P01852 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.66■■□□□ 1.06
P01852 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.65■■□□□ 1.06
P01852 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
P01852 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
P01852 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
P01852 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
P01852 Gm30023-201ENSMUST00000197970 889 ntBASIC21.63■■□□□ 1.05
P01852 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P01852 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01852 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
P01852 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01852 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01852 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
P01852 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P01852 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.6■■□□□ 1.05
P01852 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.6■■□□□ 1.05
P01852 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.59■■□□□ 1.05
P01852 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.59■■□□□ 1.05
P01852 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
P01852 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P01852 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.58■■□□□ 1.04
P01852 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
P01852 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
P01852 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P01852 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P01852 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
P01852 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
P01852 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
P01852 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
P01852 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
P01852 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01852 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01852 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P01852 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P01852 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
P01852 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
P01852 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.53■■□□□ 1.04
P01852 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
P01852 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.52■■□□□ 1.04
P01852 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.52■■□□□ 1.04
P01852 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.52■■□□□ 1.04
P01852 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
P01852 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
P01852 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.52■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms