Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Abcd4O89016 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abcd4O89016 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Abcd4O89016 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.46■■□□□ 1.03
Abcd4O89016 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Abcd4O89016 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.45■■□□□ 1.02
Abcd4O89016 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Abcd4O89016 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abcd4O89016 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abcd4O89016 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Abcd4O89016 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Abcd4O89016 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.44■■□□□ 1.02
Abcd4O89016 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abcd4O89016 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Abcd4O89016 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abcd4O89016 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Abcd4O89016 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Abcd4O89016 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Abcd4O89016 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.42■■□□□ 1.02
Abcd4O89016 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Abcd4O89016 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.42■■□□□ 1.02
Abcd4O89016 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abcd4O89016 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Abcd4O89016 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Abcd4O89016 Gm11599-201ENSMUST00000118720 878 ntBASIC21.41■■□□□ 1.02
Abcd4O89016 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abcd4O89016 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abcd4O89016 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Abcd4O89016 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Abcd4O89016 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Abcd4O89016 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.4■■□□□ 1.02
Abcd4O89016 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Abcd4O89016 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Abcd4O89016 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Abcd4O89016 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Abcd4O89016 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Abcd4O89016 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.39■■□□□ 1.01
Abcd4O89016 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Abcd4O89016 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Abcd4O89016 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Abcd4O89016 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.37■■□□□ 1.01
Abcd4O89016 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Abcd4O89016 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.36■■□□□ 1.01
Abcd4O89016 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Abcd4O89016 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.36■■□□□ 1.01
Abcd4O89016 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Abcd4O89016 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Abcd4O89016 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.35■■□□□ 1.01
Abcd4O89016 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Abcd4O89016 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Abcd4O89016 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Abcd4O89016 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Abcd4O89016 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Abcd4O89016 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Abcd4O89016 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Abcd4O89016 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.33■■□□□ 1
Abcd4O89016 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.32■■□□□ 1
Abcd4O89016 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Abcd4O89016 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.31■■□□□ 1
Abcd4O89016 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Abcd4O89016 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.3■■□□□ 1
Abcd4O89016 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcd4O89016 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.29■■□□□ 1
Abcd4O89016 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.29■■□□□ 1
Abcd4O89016 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
Abcd4O89016 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcd4O89016 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.28■■□□□ 1
Abcd4O89016 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abcd4O89016 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.28■■□□□ 1
Abcd4O89016 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Abcd4O89016 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.27■■□□□ 1
Abcd4O89016 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Abcd4O89016 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Abcd4O89016 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.27■□□□□ 0.99
Abcd4O89016 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abcd4O89016 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.26■□□□□ 0.99
Abcd4O89016 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abcd4O89016 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcd4O89016 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Abcd4O89016 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Abcd4O89016 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Abcd4O89016 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Abcd4O89016 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Abcd4O89016 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcd4O89016 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Abcd4O89016 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcd4O89016 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.23■□□□□ 0.99
Abcd4O89016 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.23■□□□□ 0.99
Abcd4O89016 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Abcd4O89016 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Abcd4O89016 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.22■□□□□ 0.99
Abcd4O89016 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Abcd4O89016 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcd4O89016 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Abcd4O89016 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.21■□□□□ 0.99
Abcd4O89016 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.21■□□□□ 0.99
Abcd4O89016 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcd4O89016 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.2■□□□□ 0.98
Abcd4O89016 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Abcd4O89016 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms