Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Apba3O88888 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.6■■□□□ 1.85
Apba3O88888 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Apba3O88888 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.59■■□□□ 1.85
Apba3O88888 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Apba3O88888 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Apba3O88888 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.58■■□□□ 1.85
Apba3O88888 Gm7432-201ENSMUST00000210343 879 ntBASIC26.58■■□□□ 1.85
Apba3O88888 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Apba3O88888 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Apba3O88888 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.57■■□□□ 1.84
Apba3O88888 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.56■■□□□ 1.84
Apba3O88888 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Apba3O88888 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.54■■□□□ 1.84
Apba3O88888 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Apba3O88888 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Apba3O88888 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.5■■□□□ 1.83
Apba3O88888 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Apba3O88888 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.48■■□□□ 1.83
Apba3O88888 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.48■■□□□ 1.83
Apba3O88888 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Apba3O88888 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Apba3O88888 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Apba3O88888 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Apba3O88888 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.46■■□□□ 1.83
Apba3O88888 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Apba3O88888 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
Apba3O88888 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Apba3O88888 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Apba3O88888 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.44■■□□□ 1.82
Apba3O88888 Gm11599-201ENSMUST00000118720 878 ntBASIC26.43■■□□□ 1.82
Apba3O88888 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
Apba3O88888 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Apba3O88888 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.42■■□□□ 1.82
Apba3O88888 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Apba3O88888 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Apba3O88888 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Apba3O88888 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Apba3O88888 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Apba3O88888 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Apba3O88888 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Apba3O88888 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Apba3O88888 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Apba3O88888 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Apba3O88888 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Apba3O88888 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.38■■□□□ 1.81
Apba3O88888 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Apba3O88888 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
Apba3O88888 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
Apba3O88888 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.36■■□□□ 1.81
Apba3O88888 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Apba3O88888 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.36■■□□□ 1.81
Apba3O88888 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Apba3O88888 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Apba3O88888 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Apba3O88888 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
Apba3O88888 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Apba3O88888 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Apba3O88888 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Apba3O88888 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Apba3O88888 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Apba3O88888 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.32■■□□□ 1.8
Apba3O88888 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Apba3O88888 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Apba3O88888 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Apba3O88888 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Apba3O88888 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Apba3O88888 Amer2-203ENSMUST00000225247 2662 ntBASIC26.29■■□□□ 1.8
Apba3O88888 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Apba3O88888 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Apba3O88888 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Apba3O88888 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Apba3O88888 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Apba3O88888 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Apba3O88888 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Apba3O88888 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Apba3O88888 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Apba3O88888 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.26■■□□□ 1.79
Apba3O88888 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Apba3O88888 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Apba3O88888 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Apba3O88888 Particl-201ENSMUST00000205370 1560 ntBASIC26.22■■□□□ 1.79
Apba3O88888 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Apba3O88888 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.21■■□□□ 1.79
Apba3O88888 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Apba3O88888 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Apba3O88888 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Apba3O88888 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Apba3O88888 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Apba3O88888 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
Apba3O88888 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.17■■□□□ 1.78
Apba3O88888 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Apba3O88888 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.16■■□□□ 1.78
Apba3O88888 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.16■■□□□ 1.78
Apba3O88888 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Apba3O88888 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Apba3O88888 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.14■■□□□ 1.78
Apba3O88888 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.14■■□□□ 1.78
Apba3O88888 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Apba3O88888 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms