Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10139O88245 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10139O88245 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Gm10139O88245 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10139O88245 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10139O88245 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC14.63□□□□□ -0.07
Gm10139O88245 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Gm10139O88245 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10139O88245 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10139O88245 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10139O88245 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC14.62□□□□□ -0.07
Gm10139O88245 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm10139O88245 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC14.61□□□□□ -0.07
Gm10139O88245 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10139O88245 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Gm10139O88245 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10139O88245 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.6□□□□□ -0.07
Gm10139O88245 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm10139O88245 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm10139O88245 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.6□□□□□ -0.07
Gm10139O88245 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Gm10139O88245 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm10139O88245 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Gm10139O88245 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm10139O88245 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm10139O88245 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.57□□□□□ -0.08
Gm10139O88245 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm10139O88245 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm10139O88245 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Gm10139O88245 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm10139O88245 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm10139O88245 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm10139O88245 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm10139O88245 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm10139O88245 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm10139O88245 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm10139O88245 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.56□□□□□ -0.08
Gm10139O88245 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm10139O88245 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC14.55□□□□□ -0.08
Gm10139O88245 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.55□□□□□ -0.08
Gm10139O88245 Zfp131-205ENSMUST00000223812 663 ntBASIC14.55□□□□□ -0.08
Gm10139O88245 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Gm10139O88245 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm10139O88245 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.54□□□□□ -0.08
Gm10139O88245 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm10139O88245 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Gm10139O88245 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm10139O88245 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm10139O88245 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Gm10139O88245 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm10139O88245 AC122428.3-201ENSMUST00000215551 2290 ntBASIC14.52□□□□□ -0.08
Gm10139O88245 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.52□□□□□ -0.09
Gm10139O88245 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Gm10139O88245 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm10139O88245 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm10139O88245 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Gm10139O88245 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.49□□□□□ -0.09
Gm10139O88245 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.49□□□□□ -0.09
Gm10139O88245 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm10139O88245 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm10139O88245 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10139O88245 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10139O88245 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10139O88245 Gm9397-201ENSMUST00000200125 605 ntBASIC14.48□□□□□ -0.09
Gm10139O88245 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10139O88245 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10139O88245 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10139O88245 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.48□□□□□ -0.09
Gm10139O88245 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10139O88245 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10139O88245 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm10139O88245 Gm24970-201ENSMUST00000175582 82 ntBASIC14.47□□□□□ -0.09
Gm10139O88245 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm10139O88245 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.47□□□□□ -0.09
Gm10139O88245 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gm10139O88245 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.46□□□□□ -0.09
Gm10139O88245 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10139O88245 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.46□□□□□ -0.09
Gm10139O88245 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10139O88245 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.46□□□□□ -0.1
Gm10139O88245 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10139O88245 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10139O88245 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10139O88245 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10139O88245 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10139O88245 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10139O88245 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10139O88245 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10139O88245 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Gm10139O88245 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm10139O88245 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm10139O88245 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm10139O88245 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm10139O88245 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm10139O88245 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm10139O88245 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm10139O88245 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm10139O88245 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm10139O88245 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm10139O88245 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms