Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.81■■□□□ 1.4
Pdlim1O70400 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pdlim1O70400 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pdlim1O70400 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.79■■□□□ 1.4
Pdlim1O70400 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pdlim1O70400 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pdlim1O70400 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pdlim1O70400 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pdlim1O70400 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
Pdlim1O70400 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pdlim1O70400 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pdlim1O70400 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.76■■□□□ 1.39
Pdlim1O70400 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pdlim1O70400 Gm30023-201ENSMUST00000197970 889 ntBASIC23.75■■□□□ 1.39
Pdlim1O70400 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Pdlim1O70400 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Pdlim1O70400 Gm6821-201ENSMUST00000107540 542 ntBASIC23.74■■□□□ 1.39
Pdlim1O70400 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pdlim1O70400 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Pdlim1O70400 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.73■■□□□ 1.39
Pdlim1O70400 Gm8503-201ENSMUST00000118131 455 ntBASIC23.73■■□□□ 1.39
Pdlim1O70400 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim1O70400 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim1O70400 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim1O70400 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdlim1O70400 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdlim1O70400 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdlim1O70400 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Pdlim1O70400 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdlim1O70400 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdlim1O70400 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdlim1O70400 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pdlim1O70400 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pdlim1O70400 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Pdlim1O70400 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim1O70400 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim1O70400 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim1O70400 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim1O70400 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim1O70400 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdlim1O70400 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdlim1O70400 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Pdlim1O70400 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.64■■□□□ 1.37
Pdlim1O70400 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pdlim1O70400 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pdlim1O70400 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pdlim1O70400 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Pdlim1O70400 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pdlim1O70400 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Pdlim1O70400 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.63■■□□□ 1.37
Pdlim1O70400 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.63■■□□□ 1.37
Pdlim1O70400 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pdlim1O70400 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Pdlim1O70400 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pdlim1O70400 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pdlim1O70400 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pdlim1O70400 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.61■■□□□ 1.37
Pdlim1O70400 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pdlim1O70400 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pdlim1O70400 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pdlim1O70400 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pdlim1O70400 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.6■■□□□ 1.37
Pdlim1O70400 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.6■■□□□ 1.37
Pdlim1O70400 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pdlim1O70400 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pdlim1O70400 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pdlim1O70400 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.58■■□□□ 1.36
Pdlim1O70400 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pdlim1O70400 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.57■■□□□ 1.36
Pdlim1O70400 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pdlim1O70400 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.57■■□□□ 1.36
Pdlim1O70400 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Pdlim1O70400 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.56■■□□□ 1.36
Pdlim1O70400 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
Pdlim1O70400 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pdlim1O70400 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.55■■□□□ 1.36
Pdlim1O70400 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.54■■□□□ 1.36
Pdlim1O70400 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pdlim1O70400 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pdlim1O70400 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.54■■□□□ 1.36
Pdlim1O70400 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.54■■□□□ 1.36
Pdlim1O70400 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.53■■□□□ 1.36
Pdlim1O70400 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pdlim1O70400 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pdlim1O70400 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pdlim1O70400 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pdlim1O70400 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.51■■□□□ 1.35
Pdlim1O70400 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pdlim1O70400 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pdlim1O70400 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pdlim1O70400 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pdlim1O70400 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Pdlim1O70400 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pdlim1O70400 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Pdlim1O70400 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pdlim1O70400 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pdlim1O70400 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pdlim1O70400 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pdlim1O70400 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pdlim1O70400 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms