Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf6bO35451 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Atf6bO35451 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf6bO35451 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf6bO35451 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf6bO35451 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6bO35451 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6bO35451 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6bO35451 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atf6bO35451 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6bO35451 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Atf6bO35451 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Atf6bO35451 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atf6bO35451 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf6bO35451 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf6bO35451 Gm6821-201ENSMUST00000107540 542 ntBASIC20.51■□□□□ 0.87
Atf6bO35451 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.51■□□□□ 0.87
Atf6bO35451 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.51■□□□□ 0.87
Atf6bO35451 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Atf6bO35451 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.5■□□□□ 0.87
Atf6bO35451 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf6bO35451 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atf6bO35451 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Atf6bO35451 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf6bO35451 Nkain2-201ENSMUST00000092602 558 ntBASIC20.49■□□□□ 0.87
Atf6bO35451 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf6bO35451 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Atf6bO35451 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Atf6bO35451 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Atf6bO35451 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf6bO35451 Gm8503-201ENSMUST00000118131 455 ntBASIC20.46■□□□□ 0.87
Atf6bO35451 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.46■□□□□ 0.87
Atf6bO35451 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Atf6bO35451 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf6bO35451 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atf6bO35451 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atf6bO35451 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Atf6bO35451 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf6bO35451 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Atf6bO35451 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.43■□□□□ 0.86
Atf6bO35451 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.43■□□□□ 0.86
Atf6bO35451 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Atf6bO35451 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.42■□□□□ 0.86
Atf6bO35451 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.41■□□□□ 0.86
Atf6bO35451 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atf6bO35451 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Atf6bO35451 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atf6bO35451 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6bO35451 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6bO35451 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
Atf6bO35451 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.38■□□□□ 0.85
Atf6bO35451 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Atf6bO35451 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atf6bO35451 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atf6bO35451 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf6bO35451 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf6bO35451 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Atf6bO35451 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.35■□□□□ 0.85
Atf6bO35451 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.35■□□□□ 0.85
Atf6bO35451 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Atf6bO35451 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf6bO35451 Amer2-203ENSMUST00000225247 2662 ntBASIC20.35■□□□□ 0.85
Atf6bO35451 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atf6bO35451 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atf6bO35451 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Atf6bO35451 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Atf6bO35451 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.33■□□□□ 0.85
Atf6bO35451 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atf6bO35451 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atf6bO35451 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf6bO35451 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Atf6bO35451 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf6bO35451 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf6bO35451 Gm30023-201ENSMUST00000197970 889 ntBASIC20.31■□□□□ 0.84
Atf6bO35451 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atf6bO35451 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6bO35451 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6bO35451 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6bO35451 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6bO35451 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atf6bO35451 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf6bO35451 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf6bO35451 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atf6bO35451 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.28■□□□□ 0.84
Atf6bO35451 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Atf6bO35451 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.27■□□□□ 0.84
Atf6bO35451 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf6bO35451 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Atf6bO35451 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf6bO35451 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Atf6bO35451 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atf6bO35451 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.26■□□□□ 0.83
Atf6bO35451 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf6bO35451 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Atf6bO35451 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6bO35451 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6bO35451 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6bO35451 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.24■□□□□ 0.83
Atf6bO35451 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6bO35451 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms