Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prrt1O35449 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.13■□□□□ 0.81
Prrt1O35449 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prrt1O35449 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.13■□□□□ 0.81
Prrt1O35449 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prrt1O35449 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prrt1O35449 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prrt1O35449 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prrt1O35449 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prrt1O35449 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prrt1O35449 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.11■□□□□ 0.81
Prrt1O35449 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.1■□□□□ 0.81
Prrt1O35449 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Prrt1O35449 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prrt1O35449 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.1■□□□□ 0.81
Prrt1O35449 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prrt1O35449 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prrt1O35449 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Prrt1O35449 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Prrt1O35449 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prrt1O35449 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prrt1O35449 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.09■□□□□ 0.81
Prrt1O35449 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prrt1O35449 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prrt1O35449 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prrt1O35449 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prrt1O35449 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt1O35449 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt1O35449 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt1O35449 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prrt1O35449 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prrt1O35449 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt1O35449 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt1O35449 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Prrt1O35449 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt1O35449 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt1O35449 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt1O35449 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt1O35449 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt1O35449 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt1O35449 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.02■□□□□ 0.8
Prrt1O35449 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Prrt1O35449 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Prrt1O35449 Peli2-204ENSMUST00000226513 1320 ntBASIC20.02■□□□□ 0.79
Prrt1O35449 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prrt1O35449 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prrt1O35449 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Prrt1O35449 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prrt1O35449 Il17rd-202ENSMUST00000223942 2186 ntBASIC20■□□□□ 0.79
Prrt1O35449 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prrt1O35449 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Prrt1O35449 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Prrt1O35449 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Prrt1O35449 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prrt1O35449 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prrt1O35449 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Prrt1O35449 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Prrt1O35449 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.98■□□□□ 0.79
Prrt1O35449 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prrt1O35449 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prrt1O35449 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prrt1O35449 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prrt1O35449 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prrt1O35449 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prrt1O35449 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prrt1O35449 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Prrt1O35449 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prrt1O35449 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prrt1O35449 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prrt1O35449 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prrt1O35449 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prrt1O35449 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prrt1O35449 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prrt1O35449 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prrt1O35449 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prrt1O35449 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prrt1O35449 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prrt1O35449 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prrt1O35449 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Prrt1O35449 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prrt1O35449 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prrt1O35449 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Prrt1O35449 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prrt1O35449 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prrt1O35449 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prrt1O35449 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prrt1O35449 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Prrt1O35449 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prrt1O35449 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Prrt1O35449 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Prrt1O35449 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prrt1O35449 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prrt1O35449 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prrt1O35449 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Prrt1O35449 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prrt1O35449 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prrt1O35449 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.86■□□□□ 0.77
Prrt1O35449 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prrt1O35449 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prrt1O35449 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms