Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Sh2b3O09039 Gm7432-201ENSMUST00000210343 879 ntBASIC21.21■□□□□ 0.99
Sh2b3O09039 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sh2b3O09039 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2b3O09039 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2b3O09039 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.2■□□□□ 0.98
Sh2b3O09039 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Sh2b3O09039 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.19■□□□□ 0.98
Sh2b3O09039 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2b3O09039 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2b3O09039 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.19■□□□□ 0.98
Sh2b3O09039 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2b3O09039 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2b3O09039 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.18■□□□□ 0.98
Sh2b3O09039 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sh2b3O09039 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.18■□□□□ 0.98
Sh2b3O09039 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2b3O09039 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
Sh2b3O09039 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2b3O09039 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2b3O09039 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2b3O09039 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2b3O09039 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.16■□□□□ 0.98
Sh2b3O09039 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2b3O09039 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2b3O09039 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2b3O09039 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2b3O09039 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2b3O09039 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh2b3O09039 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.14■□□□□ 0.97
Sh2b3O09039 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2b3O09039 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2b3O09039 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh2b3O09039 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh2b3O09039 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.13■□□□□ 0.97
Sh2b3O09039 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2b3O09039 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Sh2b3O09039 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Sh2b3O09039 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sh2b3O09039 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh2b3O09039 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sh2b3O09039 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2b3O09039 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2b3O09039 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
Sh2b3O09039 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2b3O09039 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2b3O09039 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh2b3O09039 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh2b3O09039 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh2b3O09039 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sh2b3O09039 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh2b3O09039 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh2b3O09039 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh2b3O09039 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2b3O09039 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2b3O09039 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2b3O09039 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2b3O09039 Gm11599-201ENSMUST00000118720 878 ntBASIC21.04■□□□□ 0.96
Sh2b3O09039 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sh2b3O09039 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Sh2b3O09039 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.03■□□□□ 0.96
Sh2b3O09039 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sh2b3O09039 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2b3O09039 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2b3O09039 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh2b3O09039 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh2b3O09039 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.01■□□□□ 0.95
Sh2b3O09039 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Sh2b3O09039 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh2b3O09039 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21■□□□□ 0.95
Sh2b3O09039 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh2b3O09039 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.99■□□□□ 0.95
Sh2b3O09039 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh2b3O09039 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh2b3O09039 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh2b3O09039 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh2b3O09039 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.97■□□□□ 0.95
Sh2b3O09039 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.97■□□□□ 0.95
Sh2b3O09039 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.97■□□□□ 0.95
Sh2b3O09039 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2b3O09039 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2b3O09039 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2b3O09039 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh2b3O09039 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.94■□□□□ 0.94
Sh2b3O09039 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.94■□□□□ 0.94
Sh2b3O09039 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2b3O09039 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2b3O09039 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2b3O09039 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2b3O09039 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2b3O09039 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2b3O09039 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2b3O09039 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Sh2b3O09039 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2b3O09039 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Sh2b3O09039 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh2b3O09039 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
Sh2b3O09039 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh2b3O09039 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh2b3O09039 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 120 ms