Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ercc2O08811 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ercc2O08811 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ercc2O08811 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ercc2O08811 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ercc2O08811 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ercc2O08811 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Ercc2O08811 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Ercc2O08811 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ercc2O08811 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ercc2O08811 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ercc2O08811 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ercc2O08811 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ercc2O08811 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.55■■□□□ 1.52
Ercc2O08811 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.55■■□□□ 1.52
Ercc2O08811 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ercc2O08811 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ercc2O08811 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ercc2O08811 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ercc2O08811 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ercc2O08811 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.54■■□□□ 1.52
Ercc2O08811 Gm30023-201ENSMUST00000197970 889 ntBASIC24.54■■□□□ 1.52
Ercc2O08811 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ercc2O08811 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ercc2O08811 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ercc2O08811 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Ercc2O08811 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.53■■□□□ 1.52
Ercc2O08811 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ercc2O08811 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.53■■□□□ 1.52
Ercc2O08811 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ercc2O08811 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ercc2O08811 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ercc2O08811 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ercc2O08811 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ercc2O08811 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Ercc2O08811 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Ercc2O08811 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.49■■□□□ 1.51
Ercc2O08811 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ercc2O08811 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
Ercc2O08811 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ercc2O08811 Nkain2-201ENSMUST00000092602 558 ntBASIC24.48■■□□□ 1.51
Ercc2O08811 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ercc2O08811 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
Ercc2O08811 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.47■■□□□ 1.51
Ercc2O08811 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Ercc2O08811 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Ercc2O08811 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Ercc2O08811 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.45■■□□□ 1.5
Ercc2O08811 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
Ercc2O08811 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ercc2O08811 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ercc2O08811 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ercc2O08811 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ercc2O08811 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ercc2O08811 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Ercc2O08811 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ercc2O08811 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ercc2O08811 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.42■■□□□ 1.5
Ercc2O08811 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Ercc2O08811 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ercc2O08811 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ercc2O08811 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Ercc2O08811 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ercc2O08811 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ercc2O08811 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ercc2O08811 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.4■■□□□ 1.5
Ercc2O08811 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ercc2O08811 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ercc2O08811 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Ercc2O08811 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ercc2O08811 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ercc2O08811 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Ercc2O08811 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ercc2O08811 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ercc2O08811 Gm6821-201ENSMUST00000107540 542 ntBASIC24.35■■□□□ 1.49
Ercc2O08811 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ercc2O08811 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ercc2O08811 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.33■■□□□ 1.49
Ercc2O08811 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.33■■□□□ 1.49
Ercc2O08811 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.33■■□□□ 1.49
Ercc2O08811 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Ercc2O08811 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.3■■□□□ 1.48
Ercc2O08811 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ercc2O08811 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ercc2O08811 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ercc2O08811 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ercc2O08811 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ercc2O08811 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.28■■□□□ 1.48
Ercc2O08811 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Ercc2O08811 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ercc2O08811 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Ercc2O08811 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.26■■□□□ 1.47
Ercc2O08811 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.26■■□□□ 1.47
Ercc2O08811 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ercc2O08811 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ercc2O08811 Gm8503-201ENSMUST00000118131 455 ntBASIC24.25■■□□□ 1.47
Ercc2O08811 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.25■■□□□ 1.47
Ercc2O08811 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.25■■□□□ 1.47
Ercc2O08811 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ercc2O08811 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms