Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tnfrsf11bO08712 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Tnfrsf11bO08712 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.31■■□□□ 1.48
Tnfrsf11bO08712 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Tnfrsf11bO08712 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Tnfrsf11bO08712 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.3■■□□□ 1.48
Tnfrsf11bO08712 Gm24970-201ENSMUST00000175582 82 ntBASIC24.3■■□□□ 1.48
Tnfrsf11bO08712 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Tnfrsf11bO08712 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Tnfrsf11bO08712 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Tnfrsf11bO08712 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.29■■□□□ 1.48
Tnfrsf11bO08712 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Tnfrsf11bO08712 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.28■■□□□ 1.48
Tnfrsf11bO08712 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Tnfrsf11bO08712 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Tnfrsf11bO08712 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Tnfrsf11bO08712 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Tnfrsf11bO08712 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Tnfrsf11bO08712 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Tnfrsf11bO08712 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Tnfrsf11bO08712 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Tnfrsf11bO08712 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Tnfrsf11bO08712 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.25■■□□□ 1.47
Tnfrsf11bO08712 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tnfrsf11bO08712 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.25■■□□□ 1.47
Tnfrsf11bO08712 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tnfrsf11bO08712 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tnfrsf11bO08712 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
Tnfrsf11bO08712 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tnfrsf11bO08712 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tnfrsf11bO08712 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tnfrsf11bO08712 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tnfrsf11bO08712 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Tnfrsf11bO08712 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.24■■□□□ 1.47
Tnfrsf11bO08712 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Tnfrsf11bO08712 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.23■■□□□ 1.47
Tnfrsf11bO08712 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Tnfrsf11bO08712 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Tnfrsf11bO08712 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.22■■□□□ 1.47
Tnfrsf11bO08712 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tnfrsf11bO08712 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.21■■□□□ 1.47
Tnfrsf11bO08712 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tnfrsf11bO08712 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Tnfrsf11bO08712 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tnfrsf11bO08712 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tnfrsf11bO08712 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tnfrsf11bO08712 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tnfrsf11bO08712 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tnfrsf11bO08712 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.18■■□□□ 1.46
Tnfrsf11bO08712 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tnfrsf11bO08712 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tnfrsf11bO08712 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Tnfrsf11bO08712 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.17■■□□□ 1.46
Tnfrsf11bO08712 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tnfrsf11bO08712 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tnfrsf11bO08712 Gm45855-201ENSMUST00000212546 880 ntBASIC24.16■■□□□ 1.46
Tnfrsf11bO08712 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.16■■□□□ 1.46
Tnfrsf11bO08712 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Tnfrsf11bO08712 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tnfrsf11bO08712 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Tnfrsf11bO08712 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tnfrsf11bO08712 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Tnfrsf11bO08712 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.1■■□□□ 1.45
Tnfrsf11bO08712 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Tnfrsf11bO08712 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tnfrsf11bO08712 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tnfrsf11bO08712 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tnfrsf11bO08712 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Tnfrsf11bO08712 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tnfrsf11bO08712 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tnfrsf11bO08712 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.08■■□□□ 1.44
Tnfrsf11bO08712 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
Tnfrsf11bO08712 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Tnfrsf11bO08712 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tnfrsf11bO08712 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tnfrsf11bO08712 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tnfrsf11bO08712 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.05■■□□□ 1.44
Tnfrsf11bO08712 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.05■■□□□ 1.44
Tnfrsf11bO08712 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Tnfrsf11bO08712 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tnfrsf11bO08712 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tnfrsf11bO08712 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
Tnfrsf11bO08712 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Tnfrsf11bO08712 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tnfrsf11bO08712 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
Tnfrsf11bO08712 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tnfrsf11bO08712 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tnfrsf11bO08712 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24■■□□□ 1.43
Tnfrsf11bO08712 Gm30023-201ENSMUST00000197970 889 ntBASIC24■■□□□ 1.43
Tnfrsf11bO08712 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24■■□□□ 1.43
Tnfrsf11bO08712 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tnfrsf11bO08712 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tnfrsf11bO08712 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Tnfrsf11bO08712 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tnfrsf11bO08712 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tnfrsf11bO08712 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tnfrsf11bO08712 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.99■■□□□ 1.43
Tnfrsf11bO08712 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Tnfrsf11bO08712 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Tnfrsf11bO08712 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms