Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MsmbO08540 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MsmbO08540 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MsmbO08540 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MsmbO08540 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MsmbO08540 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MsmbO08540 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MsmbO08540 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MsmbO08540 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MsmbO08540 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
MsmbO08540 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MsmbO08540 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.4■□□□□ 0.54
MsmbO08540 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MsmbO08540 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.4■□□□□ 0.54
MsmbO08540 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.4■□□□□ 0.54
MsmbO08540 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.4■□□□□ 0.54
MsmbO08540 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.37■□□□□ 0.53
MsmbO08540 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MsmbO08540 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
MsmbO08540 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MsmbO08540 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MsmbO08540 Gm30023-201ENSMUST00000197970 889 ntBASIC18.36■□□□□ 0.53
MsmbO08540 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
MsmbO08540 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
MsmbO08540 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MsmbO08540 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.34■□□□□ 0.53
MsmbO08540 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MsmbO08540 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MsmbO08540 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MsmbO08540 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.32■□□□□ 0.52
MsmbO08540 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MsmbO08540 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.31■□□□□ 0.52
MsmbO08540 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MsmbO08540 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.31■□□□□ 0.52
MsmbO08540 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MsmbO08540 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
MsmbO08540 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MsmbO08540 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.3■□□□□ 0.52
MsmbO08540 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MsmbO08540 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MsmbO08540 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
MsmbO08540 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MsmbO08540 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MsmbO08540 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MsmbO08540 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MsmbO08540 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.29■□□□□ 0.52
MsmbO08540 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
MsmbO08540 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MsmbO08540 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.27■□□□□ 0.52
MsmbO08540 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.26■□□□□ 0.51
MsmbO08540 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MsmbO08540 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MsmbO08540 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MsmbO08540 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MsmbO08540 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.25■□□□□ 0.51
MsmbO08540 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MsmbO08540 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.24■□□□□ 0.51
MsmbO08540 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MsmbO08540 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MsmbO08540 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MsmbO08540 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MsmbO08540 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MsmbO08540 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MsmbO08540 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MsmbO08540 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MsmbO08540 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MsmbO08540 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MsmbO08540 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MsmbO08540 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MsmbO08540 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.2■□□□□ 0.5
MsmbO08540 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MsmbO08540 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MsmbO08540 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
MsmbO08540 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MsmbO08540 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MsmbO08540 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MsmbO08540 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MsmbO08540 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MsmbO08540 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MsmbO08540 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MsmbO08540 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MsmbO08540 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MsmbO08540 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.17■□□□□ 0.5
MsmbO08540 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MsmbO08540 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.17■□□□□ 0.5
MsmbO08540 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.16■□□□□ 0.5
MsmbO08540 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MsmbO08540 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.16■□□□□ 0.5
MsmbO08540 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.16■□□□□ 0.5
MsmbO08540 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
MsmbO08540 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
MsmbO08540 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MsmbO08540 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MsmbO08540 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MsmbO08540 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MsmbO08540 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MsmbO08540 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MsmbO08540 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
MsmbO08540 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MsmbO08540 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms