Protein–RNA interactions for Protein: J3QPX5

Gm8888, Predicted gene 8888, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8888J3QPX5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm8888J3QPX5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Gm8888J3QPX5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm8888J3QPX5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Gm8888J3QPX5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.36■■□□□ 1.01
Gm8888J3QPX5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm8888J3QPX5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.36■■□□□ 1.01
Gm8888J3QPX5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.35■■□□□ 1.01
Gm8888J3QPX5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm8888J3QPX5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Gm8888J3QPX5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Gm8888J3QPX5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm8888J3QPX5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm8888J3QPX5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Gm8888J3QPX5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Gm8888J3QPX5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Gm8888J3QPX5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.32■■□□□ 1
Gm8888J3QPX5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm8888J3QPX5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm8888J3QPX5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm8888J3QPX5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm8888J3QPX5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm8888J3QPX5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Gm8888J3QPX5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm8888J3QPX5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.29■■□□□ 1
Gm8888J3QPX5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm8888J3QPX5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Gm8888J3QPX5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.28■■□□□ 1
Gm8888J3QPX5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm8888J3QPX5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm8888J3QPX5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm8888J3QPX5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm8888J3QPX5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm8888J3QPX5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm8888J3QPX5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm8888J3QPX5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Gm8888J3QPX5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm8888J3QPX5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.26■□□□□ 0.99
Gm8888J3QPX5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.26■□□□□ 0.99
Gm8888J3QPX5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm8888J3QPX5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm8888J3QPX5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm8888J3QPX5 Gm45855-201ENSMUST00000212546 880 ntBASIC21.25■□□□□ 0.99
Gm8888J3QPX5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm8888J3QPX5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm8888J3QPX5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm8888J3QPX5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm8888J3QPX5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.24■□□□□ 0.99
Gm8888J3QPX5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.24■□□□□ 0.99
Gm8888J3QPX5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm8888J3QPX5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm8888J3QPX5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm8888J3QPX5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm8888J3QPX5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm8888J3QPX5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gm8888J3QPX5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Gm8888J3QPX5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm8888J3QPX5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm8888J3QPX5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm8888J3QPX5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm8888J3QPX5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm8888J3QPX5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm8888J3QPX5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm8888J3QPX5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm8888J3QPX5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Gm8888J3QPX5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Gm8888J3QPX5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Gm8888J3QPX5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm8888J3QPX5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm8888J3QPX5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm8888J3QPX5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
Gm8888J3QPX5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm8888J3QPX5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.16■□□□□ 0.98
Gm8888J3QPX5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm8888J3QPX5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm8888J3QPX5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm8888J3QPX5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm8888J3QPX5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm8888J3QPX5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm8888J3QPX5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm8888J3QPX5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Gm8888J3QPX5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm8888J3QPX5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm8888J3QPX5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm8888J3QPX5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm8888J3QPX5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Gm8888J3QPX5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Gm8888J3QPX5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Gm8888J3QPX5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm8888J3QPX5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm8888J3QPX5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm8888J3QPX5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Gm8888J3QPX5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm8888J3QPX5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.09■□□□□ 0.97
Gm8888J3QPX5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm8888J3QPX5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm8888J3QPX5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm8888J3QPX5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm8888J3QPX5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm8888J3QPX5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms