Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2al1kJ3QP08 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2al1kJ3QP08 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2al1kJ3QP08 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2al1kJ3QP08 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2al1kJ3QP08 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2al1kJ3QP08 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2al1kJ3QP08 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H2al1kJ3QP08 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2al1kJ3QP08 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2al1kJ3QP08 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2al1kJ3QP08 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2al1kJ3QP08 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2al1kJ3QP08 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
H2al1kJ3QP08 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
H2al1kJ3QP08 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2al1kJ3QP08 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2al1kJ3QP08 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2al1kJ3QP08 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2al1kJ3QP08 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
H2al1kJ3QP08 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
H2al1kJ3QP08 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2al1kJ3QP08 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2al1kJ3QP08 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2al1kJ3QP08 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H2al1kJ3QP08 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2al1kJ3QP08 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2al1kJ3QP08 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
H2al1kJ3QP08 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H2al1kJ3QP08 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2al1kJ3QP08 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H2al1kJ3QP08 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H2al1kJ3QP08 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
H2al1kJ3QP08 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2al1kJ3QP08 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H2al1kJ3QP08 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
H2al1kJ3QP08 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.99□□□□□ -0.17
H2al1kJ3QP08 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2al1kJ3QP08 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
H2al1kJ3QP08 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
H2al1kJ3QP08 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2al1kJ3QP08 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2al1kJ3QP08 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2al1kJ3QP08 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2al1kJ3QP08 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2al1kJ3QP08 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2al1kJ3QP08 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2al1kJ3QP08 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
H2al1kJ3QP08 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2al1kJ3QP08 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2al1kJ3QP08 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
H2al1kJ3QP08 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
H2al1kJ3QP08 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
H2al1kJ3QP08 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
H2al1kJ3QP08 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2al1kJ3QP08 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2al1kJ3QP08 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2al1kJ3QP08 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2al1kJ3QP08 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
H2al1kJ3QP08 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2al1kJ3QP08 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2al1kJ3QP08 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2al1kJ3QP08 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
H2al1kJ3QP08 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2al1kJ3QP08 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H2al1kJ3QP08 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
H2al1kJ3QP08 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
H2al1kJ3QP08 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
H2al1kJ3QP08 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H2al1kJ3QP08 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
H2al1kJ3QP08 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2al1kJ3QP08 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
H2al1kJ3QP08 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2al1kJ3QP08 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
H2al1kJ3QP08 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.93□□□□□ -0.18
H2al1kJ3QP08 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2al1kJ3QP08 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2al1kJ3QP08 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2al1kJ3QP08 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H2al1kJ3QP08 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2al1kJ3QP08 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2al1kJ3QP08 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2al1kJ3QP08 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
H2al1kJ3QP08 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
H2al1kJ3QP08 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2al1kJ3QP08 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2al1kJ3QP08 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
H2al1kJ3QP08 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2al1kJ3QP08 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2al1kJ3QP08 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2al1kJ3QP08 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2al1kJ3QP08 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2al1kJ3QP08 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
H2al1kJ3QP08 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2al1kJ3QP08 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
H2al1kJ3QP08 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H2al1kJ3QP08 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2al1kJ3QP08 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2al1kJ3QP08 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
H2al1kJ3QP08 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms